Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4383 |
Symbol | |
ID | 4012954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4624654 |
End bp | 4625721 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637944032 |
Product | putative porin precursor transmembrane protein |
Protein accession | YP_551169 |
Protein GI | 91790217 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.806146 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAA TCATAATTTC CTTAACGTTG CTGGCCGTCT CTGGCTTTGC AACTGCTCAA TCGTCAGTTA CGCTGTTTGG TATTGCTGAC GCGACTTTTC AACGCGGCTC GGGCAGCAGT GCTAGTGCCA CGCAAATTGG CTCGGGGGGC AATTCTTCGT CGCGCATCGG CTTTCGTGGC GTTGAAGATC TGGGAGGCGG CCTCTCGGCC AGTTTCTGGC TCGAAGCTGC TTTTTCGCTG GACAACGGCA CTGGTGGCAC GACCAATACG AACAACCAAA CTACCGGAAC GACTGGTGGC GGTGGTTTGA CCTTCGGTCG CCGTTCCACG GTCAGCCTCT CTAGCGGCTG GGGCGAAGTA CGCCTCGGGC GCGATTACTC TGTGCAGTAC TACAACCGCT TCGAGTTTGA TCCTTTCGGC AACAACGGCG TGGGCTCCTC GCAGACCAAT GTGGGTTCGC TCGGAGGGCC GGTGTCCTCG CGGGTTTCCA ACGCGATCAT GTACTTCCTT CCGGCGGATC TCGGCGGCTT CTATGGCGAA TTGCAGCACT ATCGAGGTGA AAACGCGAGC AATGCCGGAA CAACCGCGGA TGATGGCACA GGCAGTGGAG CTCGCATGGG CTACCGCGCG GGGCCGTTAA ATGTGGCGAT CGCCCATGCT CGCACGCAGT ACGCACGCAC TGCGACCACG GGTGACATTG CCTCCAGCAA TATCGCTGCA CGCTACGAGT TCGGTGATTT CACGGCTATG GGCGGCTACT ACCGCGACCA GGTGGGCACG ATCGCAGGGT TGACGGGCCG TGGCGCGCAG ATCGGTGGGA TATACCGCAT AGGCTCGGGA GACATCAAGG CGCAGTGGTC GAACTACAAA ACCACTGCTG CTGGCAATCC TGAAACCAAG AAGCTCTCGC TGGGCTACGT TCACAACCTG TCGAAGCGGA CCGCAATCTA TGGCACATAT GCGCGGGTAC GCAACAGTGG AGGCGCGACT ACTGCGCTCA ACGGATCCGT CACTGCGGCG AACCAGTCAT CTTCAGGGTT TGACTTGGGT ATACGTCATT CCTTTTGA
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Protein sequence | MKKIIISLTL LAVSGFATAQ SSVTLFGIAD ATFQRGSGSS ASATQIGSGG NSSSRIGFRG VEDLGGGLSA SFWLEAAFSL DNGTGGTTNT NNQTTGTTGG GGLTFGRRST VSLSSGWGEV RLGRDYSVQY YNRFEFDPFG NNGVGSSQTN VGSLGGPVSS RVSNAIMYFL PADLGGFYGE LQHYRGENAS NAGTTADDGT GSGARMGYRA GPLNVAIAHA RTQYARTATT GDIASSNIAA RYEFGDFTAM GGYYRDQVGT IAGLTGRGAQ IGGIYRIGSG DIKAQWSNYK TTAAGNPETK KLSLGYVHNL SKRTAIYGTY ARVRNSGGAT TALNGSVTAA NQSSSGFDLG IRHSF
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