| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4354 |
|---|
| Symbol | |
|---|
| ID | 4012964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 4592642 |
|---|
| End bp | 4593721 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637944004 |
|---|
| Product | putative ABC transport system, substrate-binding exported protein |
|---|
| Protein accession | YP_551141 |
|---|
| Protein GI | 91790189 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.356253 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.710836 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTA GAGATCTTAT AAAAGCAGCC AGCTTTGCTG CAGTGGGCTC ATTTGGAGTG
ACCCGCGCTT TTTCATTCGA AGGTCCCGAA CTCTACCCGG GTGAAAAAGT CTTGTACGAA
GCTGCGGAAA AAGAAGGCTT GGTCGTCTCT TTTGACACGG GGCCGGAATG GGCAAATTGG
AAATCACTGT TCCGCGAGTT CAAGAAGCGC TATCCAGAAG TCGAACTCAC CTATAACGAC
CTGGGCTCTG CTGCAACTGT CGTTGCCCTG GAGAAGACGC GCCGCCGGCC TCAGGCAGAC
ACTGCCTACT ATTTTGCCGC TTCAGCCGTT GATGCAGTGA AGAAGGATGT CGTCGCACCA
TTTCAGCCGA TTAACTTTGA GAAGCTTCCG GCTGTGTTTC GAGAAGCGAG CGGCAAGTGG
TTCACGATCC ACACGTTAAA TATTGCCTTC CTGGTGAATA AAAAACTCGT CAAAAACTCC
CCTACCAGCT GGGCCGACCT GCTTAAACCG GAGTTTAAGA ACTCAGTTGT TTACCTTGAT
CCCCGGACAA CAGGCGTGGG CCAAGTGATG GTGTTTGCCG CTGCATACGC GACTGGAGGA
TCGGTGGATA ACGTGAAGCC GGGGATTGAT TATCTCGGGC AACTCCATGC GCTAGGTAAT
GTGCAGCGCG TCGAGGGAAC CACCCCTTAT GCGAAGTTCC TCAAAGGTGA AATACCTGTG
TGGATCAGCT ATGAAAACGA TGGCCTCAAA GCGAAACACG TGGATGGTAT GGGCGATGCC
CTAGAAGTCA TCATTCCCAA GGAGGCGAGC GTTGCCGCGC CTTACGCCAT TAGTCTTGTC
AAGAACGCCC CAAATCCGAA CAGCGGCAAG CTCTGGCTGA ATTTCATCAT GAGCGAAGTG
GGGCAAGGAC TCTTCGCTCA AGGATTCGTT CGTCCTTCGG TCCCAGGTGT GCGGCTAAGC
GCGGACATTC AAGCAAAAAT GCCGGCTGCA CCGCAGCTGC GCCCGCTTGA TGTTGTAAAG
GCGTCCGAGC GCAAGGCGGA GATTGACCGC CTTTGGGCAC AAGCTGTTCT TACCAAGTAA
|
|---|
| Protein sequence | MKRRDLIKAA SFAAVGSFGV TRAFSFEGPE LYPGEKVLYE AAEKEGLVVS FDTGPEWANW
KSLFREFKKR YPEVELTYND LGSAATVVAL EKTRRRPQAD TAYYFAASAV DAVKKDVVAP
FQPINFEKLP AVFREASGKW FTIHTLNIAF LVNKKLVKNS PTSWADLLKP EFKNSVVYLD
PRTTGVGQVM VFAAAYATGG SVDNVKPGID YLGQLHALGN VQRVEGTTPY AKFLKGEIPV
WISYENDGLK AKHVDGMGDA LEVIIPKEAS VAAPYAISLV KNAPNPNSGK LWLNFIMSEV
GQGLFAQGFV RPSVPGVRLS ADIQAKMPAA PQLRPLDVVK ASERKAEIDR LWAQAVLTK
|
|---|
| |