Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4309 |
Symbol | |
ID | 4013033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 4541751 |
End bp | 4542173 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637943961 |
Product | hypothetical protein |
Protein accession | YP_551099 |
Protein GI | 91790147 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00391503 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTCC TGTTCGCCGC TGATGGCAGC AAATACACCA AGAAGGCCCT GGCCTTCCTC GTTACCCATG AAAGCCTGAC CGGCCCCTCC GACGAGGTGG TCGTGCTCAA TGTGCAGGCG CCGGTGCCGG GCCGCGTCAA GACCATGGTC GGCGCGGCCA CGGTCAGCGC CTACCACAAG GACGAAGCGC TGAAGGTGCT GGATCCGATC GAGCGCTTCC TCAAGCGCCA CAAGCTGCAG TACCGTGTGA CCTGGACCAT CGGATCGCCG GCGGCCGAAG TGGTACGCGC AGCGCAGCGC GAGAAGGCAC ACATGATCGT CATGGGCACC CACGGCCACG GCCTGATCGG CCGCGCCGTC ATGGGCAGCG TGGCCCAGCG CGTGGTCACC GAAGCCGACA TACCGGTGCT GCTGGTCAAG TAG
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Protein sequence | MKVLFAADGS KYTKKALAFL VTHESLTGPS DEVVVLNVQA PVPGRVKTMV GAATVSAYHK DEALKVLDPI ERFLKRHKLQ YRVTWTIGSP AAEVVRAAQR EKAHMIVMGT HGHGLIGRAV MGSVAQRVVT EADIPVLLVK
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