| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4262 |
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| Symbol | |
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| ID | 4013064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4492211 |
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| End bp | 4494796 |
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| Gene Length | 2586 bp |
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| Protein Length | 861 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637943914 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_551052 |
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| Protein GI | 91790100 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGTTT CACTTTCCGT TATTGATTCA GCCGCCCAGC GGCCAGCCGC CTCGCTGCAC
CATGAGGCTT CAGTCCCTCC CTCGCATCCA TTCCTTCGGG AAACCGACCG GCTCACCCGG
CTGGCCGCCC GGTCGTGCGG CGTATCCATT GCCATGGTGG TGGTGCTGGA AGATGGCCAG
GCGGTTTTCA GTGCCGGCAC CGGCTTTGCG GCGCCAGCGC GCGAGGGGCT GGTGACGCTT
TGTGCCGCCA CGCTGGACAC ACCGCTGTGC GCCCCGACGC TGCCAGCCCC CTACGCGCCG
GGCATCCGCT TTTACCGCGG TTTCCAGATG GTCGGGGAAG ACGGTGCGCT GCTGGGCCTG
CTGGCGGTGA TGGACACACT GCCCCGAAGC CTGAGCCGCG AGCAGGAAGA AGGCCTGCAA
ACGCTGGCCA GGCTGCTCGC GGGGCAACTG GAGTTGCGCC AGCAGCGGCA CGCGCTGGAT
GCCCAGCGCC AGCACCTCGG TACGACCATG CGGCAGACCC AGGAAGACGC ACACCGGCTG
GCAACGCGGC TGAGCATCAC GCTGGAAAAC ATCTCGGAAG GCTTTTACAC GCTCGATCCC
GAATGGCGAT TTACCTACCT CAGCCGCGAA GGCGAACGGC TGCTGGGCAG GCCCGGTACG
GAGTTGCTCG GGAAAAGCAT CTGGAAGGAA TTTCCCGGCA TCATCAATAC CGCCTTCGGG
GAACAGATAG GGGCCGCGGT CGCGGGCAAC CAGCAGGCGG AGCTTGAGGC CCACTTTGCG
CCGATGGACA GGTGGTTTGA AGTCCGCGCC TACCCGTATC CGGACGGCGT GGCGATCTAC
TTTCGGGATG TCAGCGAACG GCGCAAGGCC CGCGAGCAGC TCATGCTGCT GGAAACCAGC
ATCTCGCACC TGAACGACAT CGTGCTCATC ACCGAGGCCG TGCACACCGG CAAACCCGGC
CTGCGCATCA TCTTCGCCAA CAATGCCTTC GAACGGCACA CCGGCTATGG CCGCAACGAG
GCGCTGGACC AATCACCCCG GCTGCTGTGC GGACCGTTGA CGCAGCGCAG CGAGCTGGAC
CGCATCAACA AGGCTTTCCT GCGCGGAGAG CCCGTGCAGG CCGAGCTCAT CACGTACCGC
AAGGACGGCA AGCACTTCTG GATGGAAGTC GACATCGTGC CGGTGGCCGA TGATGCAGGC
GTCTTTTTCA CCCACTGGGT GGCCGTGGGA CGGGACATCA CGCGGCGCAA GGTGGCCGAG
AGCGAAATCA TGCACCTGGC CTTCTACGAT CCGCTGACCC AGCTGCCCAA CCGCCAGCTG
CTCATGGACC GCCTGCAGCA GGCATTGGCC CACCCCCCGC AACTGCCGCG CGAGGGGGCC
CTGATGTTCA TCGACATGGA CAACTTCAAG ACCCTCAACG ACACCCTGGG CCACCATAAG
GGCGATCTGC TGCTGCAGCA GGTGGCCGAG CGCCTGACGG GGTGCGTGCG CACCGCCGAC
ACCGTGGCGC GCCTGGGCGG GGACGAGTTT GTGGTGATGC TGGAGAACCT CGGCCACGAC
CCCCGGGAGG CTGGCGCGAG GGCCCGCGCG GTGGGTGAGC AGATTCTTGC GGCGCTCAGC
GAGCCCTACC TCCTGGCAGG CTACCAGCAC TACAGCACCT GCAGCATCGG CGTGACCTCC
TTCAACCAGA ACCACGACAG CATTGGGGAC CTGCTGAAAC AGGCGGACCT GGCCATGTAC
CAGGCCAAGA CCGCCGGACG CAACACCCTC TGCTTTTTTG ACCCGGTGAT GCAGGCGGCG
GTGTCGGCCA GCGCAGCGCT GCAGTCGGAC CTGCGCCAGG GCCTGCGCGA AAAACAGTTT
CTCCTGTATT ACCAGCCACA GGTCGGGCGC GATGGCCGCA TGATGGGCGC GGAAGCCCTG
CTGCGCTGGA ACCACCCGGT GCGCGGCATG GTACCGCCTG CAGATTTCAT CCCTGTAGCG
GAAGAGTCGG GGCTGATCCT GCCGCTGGGC CAATGGGTGC TGGAAACCGC CTGCCGCCAG
CTGGGCGCCT GGGCTCAACG ACCTGAAACG GCGGCACTGA GCATTTCAGT CAACGTGAGT
GTGCGGCAGT TCCGCCACCC GGAATTCGTC GACCTCGTCA TGGCCGCCCT GAACGACACG
AAAGTCAGCC CGCACAAGCT CAAGCTGGAG CTGACCGAAA GCCTGCTGGC CGATGACATG
GAGATCACCA TCGGCAAAAT GGCCAAACTC AAGGCCATGG GGGTGACCCT GTCGATCGAC
GATTTCGGCA TGGGGTATTC CTCGCTCTCC TGCCTCAAGC GCCTGCCGCT GGACCAGCTG
AAAATCGACA AATCCTTTGT GGCCGACATA CTGCGCGACC CGAACGATGC GGCGATTGCC
CGCACCATCA TCGGCCTGGC GCAAAGCCTG GGGCTGGGCG TCGTGGCCGA GGGTGTCGAG
ACCGAAGCGC AGCGCGAGTT TCTGTACCGC CAGGGCTGCG AGAGCTACCA AGGCTACCTG
TTCTGCAAGC CGCTGCCGAT CGAGGCACTG GAAGCATTCA TGAAAAACCC GGCGCCTGGC
GGCTGA
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| Protein sequence | MSVSLSVIDS AAQRPAASLH HEASVPPSHP FLRETDRLTR LAARSCGVSI AMVVVLEDGQ
AVFSAGTGFA APAREGLVTL CAATLDTPLC APTLPAPYAP GIRFYRGFQM VGEDGALLGL
LAVMDTLPRS LSREQEEGLQ TLARLLAGQL ELRQQRHALD AQRQHLGTTM RQTQEDAHRL
ATRLSITLEN ISEGFYTLDP EWRFTYLSRE GERLLGRPGT ELLGKSIWKE FPGIINTAFG
EQIGAAVAGN QQAELEAHFA PMDRWFEVRA YPYPDGVAIY FRDVSERRKA REQLMLLETS
ISHLNDIVLI TEAVHTGKPG LRIIFANNAF ERHTGYGRNE ALDQSPRLLC GPLTQRSELD
RINKAFLRGE PVQAELITYR KDGKHFWMEV DIVPVADDAG VFFTHWVAVG RDITRRKVAE
SEIMHLAFYD PLTQLPNRQL LMDRLQQALA HPPQLPREGA LMFIDMDNFK TLNDTLGHHK
GDLLLQQVAE RLTGCVRTAD TVARLGGDEF VVMLENLGHD PREAGARARA VGEQILAALS
EPYLLAGYQH YSTCSIGVTS FNQNHDSIGD LLKQADLAMY QAKTAGRNTL CFFDPVMQAA
VSASAALQSD LRQGLREKQF LLYYQPQVGR DGRMMGAEAL LRWNHPVRGM VPPADFIPVA
EESGLILPLG QWVLETACRQ LGAWAQRPET AALSISVNVS VRQFRHPEFV DLVMAALNDT
KVSPHKLKLE LTESLLADDM EITIGKMAKL KAMGVTLSID DFGMGYSSLS CLKRLPLDQL
KIDKSFVADI LRDPNDAAIA RTIIGLAQSL GLGVVAEGVE TEAQREFLYR QGCESYQGYL
FCKPLPIEAL EAFMKNPAPG G
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