| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4197 |
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| Symbol | |
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| ID | 4013139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4411534 |
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| End bp | 4416222 |
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| Gene Length | 4689 bp |
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| Protein Length | 1562 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637943844 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_550987 |
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| Protein GI | 91790035 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGCC GGATGACGCT GCGGACGCGC CTGGTCATGC TGGTGGTTGC GGCGATTGTC
CCGCTGTTTG GCCTGTCCAT TTTCAAGGCC TGGGTCAACT CGGATGCGGC CATCAACCGG
GCCACCGCCA ACCTGCAGTT TGCAGCTTCG CTGGTGGCCG CCAACCAGGA GCGGATGGTC
GACTCAGCCC ACCAGCTGCT GATTTCGATC GCCAACGTCC CCGGCCTGAC CAGCGAAAAG
TCCCTGGACT GCCAGCGGTA TTTCAAAACC TTGCGGGAAA ACTTTTCCAT CTACGCCAAC
CTGGGCATCG TTGGCGTTGA CGGTTACGCG CGTTGCCACG GAGTCGACAG CAGTCAGCCG
GCCTATCTGG GGGATCGCGA CTACTTTCGC GCCGCAGTAA CCCGCCGCAG TTTTGTCGCC
GGCGACTACA TCCTGGGGCG ACTGTCGGGA AAACCCAGTA TCACGTTTGC ATTACCGGTG
CTCGGCGCGG ACGGGCAGGT CTTGCGGGTT GTCTATGTCG CGGTCGATTT GACCGAGATG
GCCAAGTCGG TTGCCGCCAT TCAGCTGCCA CCTGGTGCCG CGGTGGGCAT CCATGACCGC
AACGGTGTGC TGCTGGCGAG CAAGCCCGCG CTTCCCATCA AGGTCGGACA AAAGGTTGCC
AGTGTGGTGC TCCGCGAGGC CGTGCAGGCC AAGAGCACCG GGGTGCGCGA GGGGAAGGAT
GCCTCGGGTG AGCTGCGGCT CTGGGCATTC ATGCCCAGCG GTGCCTCGGC AGACTCGGCC
TTTTTTGTCG CAATCAGCAT CAACCGTGAC CTCGTGGTGG GGCCTGGCCA GCGTCAGCTG
GGGCTTGAGT TGGCCGTGCT CGCGCTGGTG GCATTTCTCG GCGCCTGGAT TGCCTGGATG
ATGGGCGGGC GCACCATCGT GAAGCCTACC CGGGAAATTC TTGACGCGAC CCGCTTGCTC
CAGAAAGGCC AGCTGGATGT ACGCATCCCG ATGCATTCGG TTCATGACGC GGGTGAGTTC
ACCAAAATTG CCGACGGTTT CAACGCCATG GCCGAGTCGC TCCAGCAGCG CGAGCAGGAC
CTGGAGGCCG AGCTGGCGCG CAGCCAGCAG TCACGTGCCA CACTGGACCT GACGGTCAAC
AGCATGCAGG AAGGCCTGAT CGCCGTGGAT GCCTTTGGCC GCCCGCTGCT GGTCAATGAA
GCGGCCTCCC GGCTGTTTGT CCTGGCGCAG GCCCCGACGG TGTTGTCCGC CGAATGGCCG
CAGCACCTCG GGCTGTATCT GCCTGGCGCT GACACCTTGT ACGCGTTTGA CCAATTGCCG
CTCTACAAGG CTCTTCAGGG GCAAAGCGGT GGACCGCAGC ACATTCTGGT GCGCAATGCC
GCCGTGCCTG CGGGGCGCCT GATCAGCTGC AGCTACCGGC CGATGCACGG CCGTGACGGT
CTGGTGGGCG CGTTGATGGT GTTTGCCGAC ATTACGCAGC TGGAGCAGTT GCAGCTGGAG
CGTGCAAAAA GCTATGCCGA GCTGCGCGAG ACCCAGCGCA AACTGCTGGA AGCGCAGCGG
ATGGGCCGTA TCGGCAACTG GGAGTCTGAT TTCCGAACCG GGCAGCTTTG GTGGTCGGAA
GAGGTTTACG CGCTGTATGG GCTGGCGCCC GGCACCGTCG AGCTCTGCAG TGATATGGCC
ATGAGCATGA TGCATCCGGA AGACAGGGCG CGCTACGTTC AGGGCTACGA GCGCTCCGTT
GGTGAGCGCG CAGAGTACGG TGTGGAGTTC CGCGTCATCA CGCCGGCCGG GGATGTCCGC
TGGATGCACC AGCTGTGCAA GCCGCATTTC GACGAGACCG GGCAGGCGAT TTACCGCACC
GGCGTGATCC AGGACATCAC GGCGCGCAAG CAGTCGGAAC TGGCGCTGGT TCATACCACC
GACCTGTTGC GCCGCACCGG CGAGATGGCC ATGGTGGGCG GTTGGGAGCT GGTGCTTGAC
GGCATGCGAT TGAGCAGTTC GGAGCAGGTT CTCCGGATTC ACGAGCTGGA GCCGGGTGCG
CCTTGGGGGG CTGAAGACGC CATCAACTCC TATCCACCGG AGGCACGGAA AACTTTCATC
GCAGCCGTCA ATGCGGCAAC CGGGCACGGC ACCCCTTGGG ACCTGGAGTT GCCCATGATC
ACGCAGACCG GCCGGCGCAT CTGGGTGAGG ACGCAGGGCC AGGCCTTCAT GCAGGATGGC
AAGGTGGTGC GGCTCGCCGG CGCCTTGCAG GACATCACTG CGCAACATGA GTCGCGTGAG
CACCTGCGCC TGCTGGAGTC CAGCATTTCA CGCCTCAACG ACATGGTGGT GATCACCGAG
GCCGTGCCCT TGGGCGAGCC CGGGCCCCGC ATTGTCTTTG TCAACGACGC CTTCGTGCGC
CGCACCGGTT ACAGCCGCGA GGAAGTGCTG GGCAAGACGC CGCGCATTTT GCAGGGCCCC
CAGACCCAGC GGGCCGAACT CGATCGCATC GGTGCAGCAC TCAGGGCGTG GCAGCCGGTC
CAGGCCGAGC TGGTCAATTA CACCAAGAGT GGCGAGCCGT TCTGGCTCGA CCTCGACATC
GTTCCCGTTG CGGACTCCCA GGGGGGCTTC ACGCACTGGG TGGCGGTCGA GCGGGACATC
ACACAGCGCA AGCTGGCCCA GCAGGCGCTC GTCGAGAGCG AGCAGCGTTA CGCCGCGCTG
TTTGAGGGGG CACCGGTGCC GATGTGGATT GTCGACGACC AGACGCATGC CTTTTTGGCG
GTCAATGGGG CGTGCACCGA GCGCTACGGC TACACGCGGG AAGAACTCCT GAGCATGACG
ATTTTTGATA TCCGTTCGGA TATTGAAGCC CAGCGCTTGA AGGCCGAAAT CGCCAGCGGC
GCCCACAAGC CCGTCAACCG CCGCGTGCAC CGATCTAGGG ACGGCGCCGA CCTCGATGTC
GAGACGGTTT CCCGCAAGAT CCAGTACGAA GGCAGACCGG CGCGGCTGGT GGTTGCGTTC
GACGTGAGCG CGCAGGTGAA AGCCGAAAAG GATGCCCAGG AATACCTGTT CACCCTGCAG
CGCGCCGCCG ACGCCGCCTC GGCCATCACC TGGCACCAGA CGCTGGATGG CACGATGCAG
GAAGTTGCGG AGCAGGTCCG GGGGGTGATT GGTACCCATC AGGCGGCGGT GAGCCTGACC
ATCAACAGCG ACTGGGCGCA GGCTGTCCAT GCGCTGTCCT TGTCCGAGAA ATATGCGGCA
TACCGTGACC TGATGGAGCC GCCGGACGGC ACCGGCATTT ACGCCGTGGT CTGCGAGGCC
AACCGGTCCA TGCGGCTGAC CCAGGCCGAG CTGGAGGCGC ACCCGCGCTG GCGCGGCTTT
GGCAGCCATG CCGGCAAGCA CCCCGCGATG CGCGGCTGGC TCGCGGTACC CTTGGTGGCC
CGGAGCGGAA AAAACATGGG CTTGCTACAG CTCTCGGACA AATACGAGGG CGAGTTCACC
CAGCAGGATG AATATGTGGC AATGGAGTTG GCGCAGCTCG CTTCCATCGC CATAGAAAAT
GTCCAGCTGC TGGAAGAAGT GGGTCGGCTC AATGCGGGGC TGGAACAAAA AGTCGCGGAG
CGCACCGCTG CGCTGACCCG ACAGGAGGCC CTGTTCCGTG CCCTGGCCGA GCGGGCGCCC
CAGGTGATCT GGACCGCCGA CCCCAGCGGC GCTCCAACCT ATTACAACCA GGCCTGGTTT
GACCTGGTGG GTGGCCGGTT TAGCGACTGG GCGGGCTCGC GCTGGCTTAC GGCTATCCAT
CCGGAAGACC TGCCCGAAGT CCAGGCGAGC TGGCAGCTGG CCAGTGCCAG CCGGTCGCAG
TATGAGAACA TCCGCCGCCT GCGCGCCAGG GACGGCAGCT ACCACACCAT GTCTTCCCGG
GCCACCCCGG TGCTTGACGA GCGGGGCGAA CTGGCCTACT GGGTGGGCAT TGATGCGGAC
ATCACCGAGA TCAAGACCAT CGAGGCCGCC TTGCGCCTGT CAAACCAGGA GCTTGAGGCC
TTCTCGTATT CTGTCTCCCA CGACCTGCGC TCGCCGCTTA ACACCATTGA CGGGTTCAGC
CGCCTGCTGT CCAAGCAGCT CCCCGGCCAT GTCAACGAGA AGAGCCGGCA CTACCTGGCG
CGCATCCAGA CGGGTGTGGC GCAGATGGGG CAACTGATTG AAGATTTGCT CTCGCTGGCA
CAGGTATCAC GCGCGCAGTT ACGGGCTGAG CTGGTGGACC TGTCGGCGCT GTCCCGCCGG
ATTCTGGGTG AGTGGCAGGC GCGCGACCCC GAACGCCGGG TCGTGGTTCA TGTTGAAAGC
GGTCTGCAGG CGCATGGCGA CTCGCGGCTT GTGGGTGTGG TGATGGAAAA CCTGCTGAGC
AATGCCTGGA AGTTCACCTC GCGCAAAGTC GGGGCGAGCA TCAGCGTCAC CCAGCAACCC
GACGCAGCAG GGCAGCCGGT CTTCGTGGTC CGGGATAACG GCGCCGGCTT CGACATGGCG
TATGCCGACA AATTGTTCAA CCCGTTTCAG CGCTTGCATG CGGCCTCGGA GTTTGCCGGC
ACCGGCATCG GGCTGGCCTC GGCCAGCCGC GTGATCGGCA GGCACGGCGG GCGGCTGTGG
GCGCAATCCG AGCCCGGTTG CGGGGCTGCT TTTTTCTTTA CCCTGCCCAG GACCGCTATT
GCGGTCTGA
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| Protein sequence | MTGRMTLRTR LVMLVVAAIV PLFGLSIFKA WVNSDAAINR ATANLQFAAS LVAANQERMV
DSAHQLLISI ANVPGLTSEK SLDCQRYFKT LRENFSIYAN LGIVGVDGYA RCHGVDSSQP
AYLGDRDYFR AAVTRRSFVA GDYILGRLSG KPSITFALPV LGADGQVLRV VYVAVDLTEM
AKSVAAIQLP PGAAVGIHDR NGVLLASKPA LPIKVGQKVA SVVLREAVQA KSTGVREGKD
ASGELRLWAF MPSGASADSA FFVAISINRD LVVGPGQRQL GLELAVLALV AFLGAWIAWM
MGGRTIVKPT REILDATRLL QKGQLDVRIP MHSVHDAGEF TKIADGFNAM AESLQQREQD
LEAELARSQQ SRATLDLTVN SMQEGLIAVD AFGRPLLVNE AASRLFVLAQ APTVLSAEWP
QHLGLYLPGA DTLYAFDQLP LYKALQGQSG GPQHILVRNA AVPAGRLISC SYRPMHGRDG
LVGALMVFAD ITQLEQLQLE RAKSYAELRE TQRKLLEAQR MGRIGNWESD FRTGQLWWSE
EVYALYGLAP GTVELCSDMA MSMMHPEDRA RYVQGYERSV GERAEYGVEF RVITPAGDVR
WMHQLCKPHF DETGQAIYRT GVIQDITARK QSELALVHTT DLLRRTGEMA MVGGWELVLD
GMRLSSSEQV LRIHELEPGA PWGAEDAINS YPPEARKTFI AAVNAATGHG TPWDLELPMI
TQTGRRIWVR TQGQAFMQDG KVVRLAGALQ DITAQHESRE HLRLLESSIS RLNDMVVITE
AVPLGEPGPR IVFVNDAFVR RTGYSREEVL GKTPRILQGP QTQRAELDRI GAALRAWQPV
QAELVNYTKS GEPFWLDLDI VPVADSQGGF THWVAVERDI TQRKLAQQAL VESEQRYAAL
FEGAPVPMWI VDDQTHAFLA VNGACTERYG YTREELLSMT IFDIRSDIEA QRLKAEIASG
AHKPVNRRVH RSRDGADLDV ETVSRKIQYE GRPARLVVAF DVSAQVKAEK DAQEYLFTLQ
RAADAASAIT WHQTLDGTMQ EVAEQVRGVI GTHQAAVSLT INSDWAQAVH ALSLSEKYAA
YRDLMEPPDG TGIYAVVCEA NRSMRLTQAE LEAHPRWRGF GSHAGKHPAM RGWLAVPLVA
RSGKNMGLLQ LSDKYEGEFT QQDEYVAMEL AQLASIAIEN VQLLEEVGRL NAGLEQKVAE
RTAALTRQEA LFRALAERAP QVIWTADPSG APTYYNQAWF DLVGGRFSDW AGSRWLTAIH
PEDLPEVQAS WQLASASRSQ YENIRRLRAR DGSYHTMSSR ATPVLDERGE LAYWVGIDAD
ITEIKTIEAA LRLSNQELEA FSYSVSHDLR SPLNTIDGFS RLLSKQLPGH VNEKSRHYLA
RIQTGVAQMG QLIEDLLSLA QVSRAQLRAE LVDLSALSRR ILGEWQARDP ERRVVVHVES
GLQAHGDSRL VGVVMENLLS NAWKFTSRKV GASISVTQQP DAAGQPVFVV RDNGAGFDMA
YADKLFNPFQ RLHAASEFAG TGIGLASASR VIGRHGGRLW AQSEPGCGAA FFFTLPRTAI
AV
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