Gene Bpro_4187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4187 
Symbol 
ID4013164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4399509 
End bp4400690 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content66% 
IMG OID637943834 
ProductAcetyl-CoA C-acetyltransferase 
Protein accessionYP_550977 
Protein GI91790025 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGATT CCATCGTTAT TCTCGGCGCC GCCCGTACCC CCATGGGCGG CTTCCAGGGC 
GACTTCAGTT CGCTCGCCGC ACACGACCTC GGCGGCGCAG CCATCAAGGC CGCCATTGAG
CGCGCGGGCA TCGCGCCTGA AAAAGTCGAC GAAGTCCTGT TCGGCAACTG CCTGATGGCG
GGCCAGGGCC AGGCGCCGGC GCGGCAAGCC GGCTTCAAGG GCGGCCTGCC TGCCAGCGCA
GGTGCCGTGA CGCTTTCCAA GATGTGCGGC TCCGGCATGG AAGCCACCAT GCTGGCGCAC
GACCAACTGA TGGTGGGCAG CCGTGACGTG ATGGTGGCCG GCGGCATGGA AAGCATGACC
AACGCACCGC ATTTGTTGCT CAAGGGCCGC AGCGGTGTGC GCATCGGCCA CGACCGCATC
TTTGACCACA TGATGCTGGA CGGCCTGGAA GACGCCTACG AGCCCGGCCG CGCCATGGGC
ACCTTTGGCG AGCAGTGCGC CGAAAAATAC CAGTTCACCC GTGAAGCGCA GGACGCTTTC
GCGGTGGCCA GCGTGCAGCG CGCCAAGGCG GCCACGGAGT CTGGAGCCTT CAAGGCCGAG
ATCACGCCGG TCACCGTGAA AGGCCGGGCC GGCGACACCG TGATTTCCAT CGATGAAGGT
CCGGGCAAGG TCAAGCTTGA CAAGATCGCG GCGCTGCGGC CCGCCTTCAA GAAAGACGGC
ACCATCACCG CCGCATCCAG CTCGTCGATC AATGACGGCG CCGCGGCGCT GGTGCTGACC
CGCGAATCCA CCGCCAAAGA GCTGGGCGCC ACACCCATCG CCCGCATCGT CGGCCATGCC
ACCTTTGCCC AGGCGCCCGA GTGGTTCACC ACCGCACCGG TGGGCGCGGT GCAAAAGCTG
CTCAAGAAGA TCGGCTGGAG CGTGAAAGAC GTGGACCTGT GGGAAGTCAA CGAAGCCTTT
GCCGTGGTGC CCATGGCCGC GATGAAAGAA CTCGGCATCA GCCACGACAT CGTGAATGTG
AATGGCGGCG CCTGCGCGCT GGGCCACCCG ATTGGCGCCA GCGGTGCCCG CATCATCGTC
ACGCTGATCC ATGCGCTGAA AGCCCGCGGC CTGAAAAAAG GCGTGGCGAC GCTGTGCATC
GGCGGCGGAG AAGGCACGGC GCTGGCGGTT GAGCTGATGT AA
 
Protein sequence
MSDSIVILGA ARTPMGGFQG DFSSLAAHDL GGAAIKAAIE RAGIAPEKVD EVLFGNCLMA 
GQGQAPARQA GFKGGLPASA GAVTLSKMCG SGMEATMLAH DQLMVGSRDV MVAGGMESMT
NAPHLLLKGR SGVRIGHDRI FDHMMLDGLE DAYEPGRAMG TFGEQCAEKY QFTREAQDAF
AVASVQRAKA ATESGAFKAE ITPVTVKGRA GDTVISIDEG PGKVKLDKIA ALRPAFKKDG
TITAASSSSI NDGAAALVLT RESTAKELGA TPIARIVGHA TFAQAPEWFT TAPVGAVQKL
LKKIGWSVKD VDLWEVNEAF AVVPMAAMKE LGISHDIVNV NGGACALGHP IGASGARIIV
TLIHALKARG LKKGVATLCI GGGEGTALAV ELM