| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4077 |
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| Symbol | |
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| ID | 4013249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4286867 |
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| End bp | 4288060 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637943725 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_550868 |
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| Protein GI | 91789916 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.406795 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA AGACTCTTAT CGCCGCCATG GCCATCGGCC TGGGCGCCGC CGCTTCGGCC
CAGAACACGG GACCGGTCAA GATCGGCTTC ATCACCGACA TGTCCAGCCT CTACGCGGAC
ATCGACGGCC CGGCCGGCGG TGAAATGATC AGGTGGGCGG CCCAGGACTT CGGCGGCAAG
GTGCTGGGAC GCCCGATTGA AGTGCTGACG GCCGACCACC AGAACAAGGC CGACGTGGCC
AGCTCCAAGG CCCGCGAGTG GATCGACAAG GACGGCCTGT CCGCGCTGAT CGGCGGCACC
AATTCGGGCA CGGCACTGGC CATGTCCAAG GTCGCGACTG AAAAGAAACG CCCTTTCATC
GTGATTGGGG CTGGCTCTGC CCGCCTGACC AATGAAGATT GCACGCCCTA CACCATTCAT
TACGCCTACG ACACGGTGGC GCTGGCCAAG GTCGCTGGCT CGGCGCTGGT CAAGGCCGGC
GCCAAGAACT GGTTCTTCCT GACCGCTGAC TACGCCTTTG GCCATTCGCT GGAGTCCGAT
TCCGCCACGG TCGTGAAGGC CAACGGCGGT ACCGTGGTGG GCACGGTGCG GCATCCGCTG
AACGCTTCCG ACTTCTCGGC CTTCCTGCTG CAGGCGCAAA CTTCCAAGGC GCAAATCCTG
GGTCTGGCCA ATGCCGGCGG TGACTTCACC AACGCCATGA AAGCGGCCAA AGAGTTCGGC
ATCACCAAAA GCATGAAGAT TGCCGGTCTG CTGGTGTTTA TCAACGACGT GCACAGCCTG
GGCCTGGCCA ACACCGAAGG CCTGCAACTG GCCGACAGCT GGTACTGGAA CCAGGACGAC
GCATCACGCA AATTTGCCAA GCGCTTTTTT GACAAATACA AGCGCATGCC GTCGAGCCTG
CAGGCTGCCG ACTACTCGGC CGCATCCAAC TACCTGAAAG CCGTGCAAAC CGCCGGCACC
ACGGATGCTG ACAAGGTGAT GAGCACGCTG AAAACCATGA AGTTTGACGA CTTCTACAGC
AAGGGCCAGA TTCGCGCCGA CGGCCGCATG ATTCACGACA TGTACCTCTA CCAGGTCAAA
GGCACCAAAG AATCGAGCAC ACCGTGGGAC TACTACAAGA TGGTGGCCAA GGTTCCCGGT
GACCAGGCGT TCACGACGGT TGCCGAGTCC AAATGCGCGC TGGTCAAGAA GTAA
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| Protein sequence | MKLKTLIAAM AIGLGAAASA QNTGPVKIGF ITDMSSLYAD IDGPAGGEMI RWAAQDFGGK
VLGRPIEVLT ADHQNKADVA SSKAREWIDK DGLSALIGGT NSGTALAMSK VATEKKRPFI
VIGAGSARLT NEDCTPYTIH YAYDTVALAK VAGSALVKAG AKNWFFLTAD YAFGHSLESD
SATVVKANGG TVVGTVRHPL NASDFSAFLL QAQTSKAQIL GLANAGGDFT NAMKAAKEFG
ITKSMKIAGL LVFINDVHSL GLANTEGLQL ADSWYWNQDD ASRKFAKRFF DKYKRMPSSL
QAADYSAASN YLKAVQTAGT TDADKVMSTL KTMKFDDFYS KGQIRADGRM IHDMYLYQVK
GTKESSTPWD YYKMVAKVPG DQAFTTVAES KCALVKK
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