| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4076 |
|---|
| Symbol | |
|---|
| ID | 4013248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 4286061 |
|---|
| End bp | 4286765 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637943724 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_550867 |
|---|
| Protein GI | 91789915 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.229588 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAG AGCTCCTCAA AATCGAAGAC CTGCACGCCT GGTACGGCGA GTCGCACATC
CTGCATGGCG TGAACCTGAC CGTGAATGAA GGCGAGGTAG TGACGCTGCT GGGCCGCAAT
GGCGCCGGCC GCACCACCAC TCTGCGCGCC ATTGTCGGCA TGACCGGCGC CCGCAAGGGG
TCAATCAGGA TCAATGGCGA AGAGGCGATC AAGCTGGCAC CGCACAAGGT GGCCCGCCTG
GGAATTGGCT ACTGCCCCGA GGAGCGCGGT ATTTTCGCCA GCCTGTCGGC CGAAGAAAAC
CTGATGCTGC CGCCCAACAT TGCGCCCGGC GGCATGAGTG TTGCCGAGAT CTACGCCATG
TTTCCAAACC TGAAAGAGCG TGCGGCCAGC CCCGGCACGC GCCTGTCGGG TGGTGAGCAG
CAGATGCTGG CCGTCGCCCG CATTTTGCGC ACCGGCGCCC GGCTGTTGCT GCTCGATGAG
ATCTCAGAAG GCCTGGCACC CGTCATCGTG CAGAAGCTCG CCGAGATGAT CCTGGCCCTG
AAGGCCAAGG GCTACACCAT CGTGCTGGTC GAGCAGAACT TCCGCTTTGC CGCGCCGCTG
GCCGACCGTT TCTATGTCAT GGAGCATGGC CGCATCGTCA AGCAGTTTGC CCAGGCCGAG
TTGTCGCAAA ACATGGGCAT GCTGCAGGAA TATTTGGGGG TGTAG
|
|---|
| Protein sequence | MTKELLKIED LHAWYGESHI LHGVNLTVNE GEVVTLLGRN GAGRTTTLRA IVGMTGARKG
SIRINGEEAI KLAPHKVARL GIGYCPEERG IFASLSAEEN LMLPPNIAPG GMSVAEIYAM
FPNLKERAAS PGTRLSGGEQ QMLAVARILR TGARLLLLDE ISEGLAPVIV QKLAEMILAL
KAKGYTIVLV EQNFRFAAPL ADRFYVMEHG RIVKQFAQAE LSQNMGMLQE YLGV
|
|---|
| |