Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4066 |
Symbol | |
ID | 4013277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4274737 |
End bp | 4275378 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637943714 |
Product | hypothetical protein |
Protein accession | YP_550857 |
Protein GI | 91789905 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00119297 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.232767 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGACA TACGACGCAT CTTTACGCAC GTGGAGCAAA TTCAGCACGA ATTTGGTCCG GTGGCGCGAA CGCCACTGCT GCGCGGGGCG ATTGCCGCCG TGCTGACCAA TCCGTTCGCC GGGCGCTATG AGCCTGACAT CTTGCCGATG ATGGATGAGC TTCAGCCCGT CGGTCTCGAG ATGGCCCAGC GCCTGCGCGC GGCGATGGAT GTGCCGGCGG ACCGCATCGA GGGCTACGGA AAGGGTGCCA TTGTGGGCGC GGCGGGAGAG CTTGAGCACG GTGCGCTCTG GCATGTGCCG GGGGGTTACG CGATGCGTGA GCTGCTGGGC TGGAAAGGTG ACCGAAATGC CTATGCCAAG GGACAGGCCG AAGAAAAAAC CGGGCAGCCC GGCAATGCGT TGTCTATCGT GCCGTCAACC AAAAAAGTGG GCGGACCAGG CGCTGCGCTG GATGTGCCGC TGACGCATGT CAACGCCAGT TACGTGCGCA GTCATTTCGA TGCCATCGAA GTGCGTGTTC CGGGCGCACC CCTGCCGGAC GAAATCGTCT TCATTCTTGC GATGAGCACA GGCCCCCGCA TCCACGCGCG GGTGGGCGGG CTGGCTGCCA GCGCCATCAG CAAGTGGGAC GGTTTGCGCT GA
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Protein sequence | MIDIRRIFTH VEQIQHEFGP VARTPLLRGA IAAVLTNPFA GRYEPDILPM MDELQPVGLE MAQRLRAAMD VPADRIEGYG KGAIVGAAGE LEHGALWHVP GGYAMRELLG WKGDRNAYAK GQAEEKTGQP GNALSIVPST KKVGGPGAAL DVPLTHVNAS YVRSHFDAIE VRVPGAPLPD EIVFILAMST GPRIHARVGG LAASAISKWD GLR
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