| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4054 |
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| Symbol | |
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| ID | 4013265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4256641 |
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| End bp | 4260060 |
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| Gene Length | 3420 bp |
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| Protein Length | 1139 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637943702 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_550845 |
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| Protein GI | 91789893 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1703] Putative periplasmic protein kinase ArgK and related GTPases of G3E family
[COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.632309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.527832 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACATGCA CCAGCTTCCC GGAGATCCGC ATGACCGACC TGTCCGCAGA ATACAAGGCC
CTCGCCAGTT ACCGCCCCAC GCACAAGGTG CGCTTTGTCA CGGCGGCCTC GCTGTTTGAC
GGTCACGATG CCGCCATCAA CATCATGCGG CGCATCCTGC AAAGCATGGG CGCCGAGGTG
ATCCACCTGG GCCACAACCG CAGCGTGGAG GAAGTCGTCA CGGCCGCGCT GCAGGAGGAC
GCACAGGGCA TTGCCATCAG CTCCTACCAG GGCGGGCACG TCGAGTACTT CAAGTACATG
GTCGATCTGC TCAAAAGCCG TGGCGGTGAA CACATCCAGG TCTTTGGCGG CGGTGGCGGT
GTCATCGTGC CGCCCGAAAT CCGTGAGCTG CAGGCCTATG GCGTCACGCG CATCTACAGC
CCCGAAGACG GCCAGAAGAT GGGGCTGGCG GGCATGATCG GCGAGATGGT GATGCGCTGC
GACCAGGACC TGACCGGCTT TGCTCCCAAG GACATCAAAG CCATTGAAGG CCATGGCGAG
ATGAACTGGC GCGCGCTGGC GCAACTCATC ACCGCGCTTG AAAACGAGAA GGCCAATCCG
GCGCTAGTGG AGGCCCTGCG GGCGCAGGCT GCCACCAAAA AGATACCGGT ACTGGGCATT
ACCGGCACCG GCGGCGCCGG CAAGTCATCA CTGACGGACG AGTTGATTCG CCGTCTGCGG
CTGGACCAGA ACGACCGGCT GCGCGTGGCC GTGATCTCCA TCGACCCGTC CCGCCGCAAG
AGCGGCGGCG CCCTGCTCGG CGACCGCATC CGCATGAATG CCATCAACCC CTGGACTGTG
GCGTCTTCGC AAGCTCAAGC CGCCGGGCCG GCTTTGCCGG ACGGCAGGCG GGCGGCCCCC
TCGGGGGGCA GCGAACCACA CGCAGTGGGG AGCGTGGGGG CTCGTGTCTT CATGCGTTCG
CTGGCTACCC GCGAATTCGG CAGCGAGATC AGCAAGGCGC TGCCCGAGGT GATTGCCGCC
TGCAAGGCCG CGGGCTTTGA CCTGATCGTC GTCGAAACGT CCGGCATTGG CCAGGGCGAT
GCCGCCATCG TGCCGCATGT CGATGTGCCC ATGTATGTGA TGACGCCCGA GTTCGGCGCG
GCCAGCCAGC TCGAGAAAAT CGACATGCTG GACTTTGCCG AGTTTGTGGC CATCAACAAG
TTCGACCGCA AGGGCTCGCT CGATGCCCTG CGTGATGTCT CCAAGCAGGT GCAGCGCAAC
AAGGAAGCCT GGACCACGCC GGCCGACCAG ATGCCGGTCT TTGGCACCAT GGCTGCACGT
TTCAATGACG ACGGCGTCAC CGCGCTGTAC CAGGCGCTCA AGCCGCGCCT GGCCGCGCTG
GGCCTGCCGC TTGAGCAGGG CGGCCTGCCG GTGGTGGAAG TCCGCCACAG CACCAATCAG
ACGCCGGTGG TCCCCGCAGC GCGCACGCGT TACCTGGCCG AGATCAGCGA CACGGTGCGC
GGCTACAAGA AACGGGCCCG CGAGCAGGCC AGGCTGGCCC GCGAAGTCCA GCAACTGCAG
GCCGCCGCCG CCATGCTCAA GGTCGACAAG CCCGATCGCG CGCCCGCCGC CGAGGCCGCG
CTCGACCTGG CGGGCCAGCG CAAGGCGCGC ATGGATGCCG ATGCGCGGCG CCTGCTGGCC
CAGTGGCCCG ACATGCAAAA AGCCTATGCG GGTGATGAAT ACGTGGTGAA GATCCGCGAC
AAGGAAATCC GCACGGCACT CACCACCCAA TCGCTCTCGG GCACCACCAT CCGCAAGGTC
TGCCTGCCCA AGTATGAAGA CCACGGCGAG ACGCTCCAGT GGCTGATGCT CGACAACGTG
CCCGGCAGCT ATCCCTACAC GGCCGGCACC TTCGCCTTCA AGCGCGAGGG CGAAGACCCG
ACCCGCATGT TTGCCGGCGA GGGCGATGCC TTCCGCACGA ATACGCGCTT CAAGCTGCTG
AGTGAGGGCA TGGCCGCCAA GCGCCTGTCC ACCGCTTTTG ACTCGGTGAC GCTGTACGGT
AACGACCCCG CCGTGCGCCC CGACATTTAC GGCAAGGTCG GCAACTCGGG CGTGAGCATT
GCCACGCTGG ACGACATGAA AGTGCTCTAC GACGGCTTCG ACCTGTGCAG CCCCAGCACC
TCCGTGAGCA TGACCATCAA CGGCCCGGCG CCGACCATCC TGGCGATGTT CATGAACACC
GCCATCGACC AGAACCTGGA GAAATTCAGG GTCGACAACG GGCGCCAGCC CACCGACACC
GAAGCCGCCA AGATCCGCGA ATGGGTGCTG GCCAATGTGC GCGGCACGGT GCAGGCCGAC
ATCCTGAAGG AAGACCAGGG CCAGAACACC TGCATCTTCT CGACCGAGTT CAGCCTGAAG
GTGATGGGCG ACATCGCAGA GTACTTCGTG CACCACAACG TGCGCAACTT CTACAGCGTT
TCCATCAGCG GCTACCACAT CGCCGAAGCC GGCGCCAACC CGATTTCGCA GCTGGCCTTC
ACACTGTCCA ACGGCTTCAC CTTCGTTGAA GCCTACCTGG CGCGCGGCAT GCACATTGAC
GACTTCGCGC CCAACCTGAG CTTTTTCTTC AGCAACGGCA TGGACCCGGA GTACACCGTG
ATGGGCCGCG TCGCGCGCCG CATCTGGGCG GTGGCGATGA AGGAAAAATA CGGCGCCAAC
GAGCGCAGCC AGAAGCTCAA ATACCACATC CAGACCTCGG GCCGCAGCCT GCACGCGCAG
GAAATCCAGT TCAACGACAT CCGCACCACG CTGCAGGCCC TGATTGCCAT TTACGACAAC
TGCAACAGCC TGCACACCAA CGCCTTTGAC GAAGCCATCA CCACGCCGAC CGAAGAGTCG
GTGCGCCGCG CGATGGCCAT CCAGCTCATC ATCAACCGCG AATGGGGTCT GGCCAAGAAC
GAGAACCCCT CGCAGGGCGC TTTCATCATC GAAGAGCTGA CCGAGCTGCT GGAAGAAGCC
GTGCTGCTGG AGTTCGAGCG CATCGCCGAG CGCGGCGGCG TGCTGGGCGC GATGGAGACC
GGCTACCAGC GCGGCCGCAT CCAGGACGAG TCGATGCACT ACGAGATGCT CAAGCACACC
GGCGAGCTGC CCATCATCGG CGTCAATACC TTTCGCAACC CGCATGGCGA AGTGGTGCAG
GACAAGCTGG AGCTGGCGCG CTCGACCGAC GAAGAAAAGC AGAGCCAGCT GAAAAGGCTG
GAAGCGTTCC ACCAGCTCCA CGCCAGCGAA TCACCGGCCA TGCTCAAGCG CCTTCAGCAG
GCCGTGATTG AAAACCGTAA CGTGTTCGAA GTGCTGATGG AGGCCGTGCG GGTCTGCTCG
CTGGGGCAGA TCACCAATGC GCTGTTTGAG GTGGGCGGGC AGTACCGGCG CAATATGTGA
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| Protein sequence | MTCTSFPEIR MTDLSAEYKA LASYRPTHKV RFVTAASLFD GHDAAINIMR RILQSMGAEV
IHLGHNRSVE EVVTAALQED AQGIAISSYQ GGHVEYFKYM VDLLKSRGGE HIQVFGGGGG
VIVPPEIREL QAYGVTRIYS PEDGQKMGLA GMIGEMVMRC DQDLTGFAPK DIKAIEGHGE
MNWRALAQLI TALENEKANP ALVEALRAQA ATKKIPVLGI TGTGGAGKSS LTDELIRRLR
LDQNDRLRVA VISIDPSRRK SGGALLGDRI RMNAINPWTV ASSQAQAAGP ALPDGRRAAP
SGGSEPHAVG SVGARVFMRS LATREFGSEI SKALPEVIAA CKAAGFDLIV VETSGIGQGD
AAIVPHVDVP MYVMTPEFGA ASQLEKIDML DFAEFVAINK FDRKGSLDAL RDVSKQVQRN
KEAWTTPADQ MPVFGTMAAR FNDDGVTALY QALKPRLAAL GLPLEQGGLP VVEVRHSTNQ
TPVVPAARTR YLAEISDTVR GYKKRAREQA RLAREVQQLQ AAAAMLKVDK PDRAPAAEAA
LDLAGQRKAR MDADARRLLA QWPDMQKAYA GDEYVVKIRD KEIRTALTTQ SLSGTTIRKV
CLPKYEDHGE TLQWLMLDNV PGSYPYTAGT FAFKREGEDP TRMFAGEGDA FRTNTRFKLL
SEGMAAKRLS TAFDSVTLYG NDPAVRPDIY GKVGNSGVSI ATLDDMKVLY DGFDLCSPST
SVSMTINGPA PTILAMFMNT AIDQNLEKFR VDNGRQPTDT EAAKIREWVL ANVRGTVQAD
ILKEDQGQNT CIFSTEFSLK VMGDIAEYFV HHNVRNFYSV SISGYHIAEA GANPISQLAF
TLSNGFTFVE AYLARGMHID DFAPNLSFFF SNGMDPEYTV MGRVARRIWA VAMKEKYGAN
ERSQKLKYHI QTSGRSLHAQ EIQFNDIRTT LQALIAIYDN CNSLHTNAFD EAITTPTEES
VRRAMAIQLI INREWGLAKN ENPSQGAFII EELTELLEEA VLLEFERIAE RGGVLGAMET
GYQRGRIQDE SMHYEMLKHT GELPIIGVNT FRNPHGEVVQ DKLELARSTD EEKQSQLKRL
EAFHQLHASE SPAMLKRLQQ AVIENRNVFE VLMEAVRVCS LGQITNALFE VGGQYRRNM
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