| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4018 |
|---|
| Symbol | |
|---|
| ID | 4013307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 4217376 |
|---|
| End bp | 4218293 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637943667 |
|---|
| Product | glucose-1-phosphate thymidylyltransferase |
|---|
| Protein accession | YP_550810 |
|---|
| Protein GI | 91789858 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.520137 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCTT CCCCACTCAC CACTAGCCAC TCACCACTAG CCAGGAAGGG CATCATCCTC
GCCGGCGGCT CAGGCACCCG CCTGCACCCG GCCACGCTGG CCATCAGCAA ACAGCTGCTC
CCGGTGTACG ACAAGCCCAT GATCTACTAC CCGCTCAGCA CTCTCATGCT CGCGGGCATG
CGCGACATCC TCGTCATCAG CACCCCGCAA GACACACCGC GTTTTCAGCA ACTGCTGGGC
GACGGCAGCC AGTGGGGCCT GAACCTGCAG TATGCCGTGC AGCCCAGCCC AGACGGCCTG
GCGCAGGCTT TCATCATCGG TGAGCCGTTC ATTGGCAACT CGCCCAGTGC ACTGGTGCTT
GGTGACAATA TTTTTTATGG TCATGACTTT CACCAATTGC TGGGCAGCGC CATGGCCAGA
ACTGAGGGTG CCAGCGTTTT CGCCTACCAT GTGCACAACC CGGAGCGCTA TGGCGTGGCG
GAGTTCGACG CGCGCGGCAA AGTGCTGTCG CTGGAAGAAA AGCCAAAACA ACCCAAGTCA
AACTACGCCG TAACGGGCCT GTATTTTTAC GACAATCAGG TGGTTGACTT GGCCAAAAGC
CTGAAGCCAT CCCTGCGCGG CGAGCTTGAA ATAACTGACC TTAACCGCTT GTATCTTGAG
CGCGGCCAAC TCGATGTTGA AATCATGGGC CGGGGCTATG CCTGGCTTGA CACCGGTACC
CACGAATCGT TGCTGGAGGC CGGCCAGTTC ATTGCCACCC TGGAAAACCG CCAAGGCCTG
AAGGTAGCCT GCCCCGAAGA AATCGCTTAT CGCCAGCACT GGATTGATGC CTCCCAGCTG
GAAAAGCTTG CACAGCCCCT CGCCAAAAAC GGCTATGGGC AGTACCTGCT TCGCATCCTC
AAAGAAAAAG TATTTTGA
|
|---|
| Protein sequence | MTSSPLTTSH SPLARKGIIL AGGSGTRLHP ATLAISKQLL PVYDKPMIYY PLSTLMLAGM
RDILVISTPQ DTPRFQQLLG DGSQWGLNLQ YAVQPSPDGL AQAFIIGEPF IGNSPSALVL
GDNIFYGHDF HQLLGSAMAR TEGASVFAYH VHNPERYGVA EFDARGKVLS LEEKPKQPKS
NYAVTGLYFY DNQVVDLAKS LKPSLRGELE ITDLNRLYLE RGQLDVEIMG RGYAWLDTGT
HESLLEAGQF IATLENRQGL KVACPEEIAY RQHWIDASQL EKLAQPLAKN GYGQYLLRIL
KEKVF
|
|---|
| |