| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3965 |
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| Symbol | |
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| ID | 4013371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4157359 |
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| End bp | 4157934 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637943614 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_550757 |
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| Protein GI | 91789805 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.123911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCA TTCCTGACAT CGACGCCCTG CCCAAGGTCA TGGGCGACGA CGGCGAGTTC
CATGCCACCG ACGACGCGGT CGACCTGTCG GACACACCCG CCGAGGCCTG GGTGGCCCTT
TTGTTTTTCT GGGCACTGGG CCTGACGGTT TTCTACCAGT TCTTCACCCG CTATGTGATG
AACGACTCGG CCGCCTGGAC CGAAGAGATC GCCCGCTACC TGCTGATCGC CACCGTGTTC
GTGGGCGCGG CCATTGGCGT GGCCAAGAAC AACCACATCC AGGTCGACTT TTTCTACCGC
TTCATGCCGC CCTGGCTGGG CCGGGCCATG GCCTTGCTCA CCGATGTGCT GCGCATCGCC
TTCCTGGCGG CTGCGGTTGT ATTGACCTGG CAAATGATGA ACAAGATGGG CAATTACAAA
ATGACCATCG TTGATTTGCC GATGAACCTG GTGTATGGCG TTTGCCTGAT CGGCTTTGCG
GCCATGTGCG TGCGCTCGGT CTGGGTCATG CATGTGCACG TGAAGCGCGG CTACAGCGTG
CTGGAACGCC CTGAATCCAC CATGGAGGAC CGCTAA
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| Protein sequence | MITIPDIDAL PKVMGDDGEF HATDDAVDLS DTPAEAWVAL LFFWALGLTV FYQFFTRYVM
NDSAAWTEEI ARYLLIATVF VGAAIGVAKN NHIQVDFFYR FMPPWLGRAM ALLTDVLRIA
FLAAAVVLTW QMMNKMGNYK MTIVDLPMNL VYGVCLIGFA AMCVRSVWVM HVHVKRGYSV
LERPESTMED R
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