Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3947 |
Symbol | |
ID | 4013392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4136735 |
End bp | 4137835 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637943596 |
Product | ABC transporter related |
Protein accession | YP_550739 |
Protein GI | 91789787 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0174728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTTC TGACCCTGGC GAATGTGAAC AAGTCCTATG GCGCCACGCA CGCCGTGATC GACATGAACC TGTCGGTGGA GAAGGGCGAA TTTGTCTCGC TGCTCGGGCC TTCGGGCTGC GGCAAGACCA CGACGCTGCA AATGATTGCC GGTTTTGCCG ATGTCACCGC CGGCCGCATC ACGCTCGATG GCCGTGACAT CACCCACGCC AAACCGAACA CGCGCGGCCT GGGTATCGTG TTTCAGAGCT ATGCGCTGTT CCCCCACATG AGCGTGCACG ACAACGTGAG CTTTGGCCTG GAGATGCGGC GTATGCCCAA AAACGAGCGC ACCGAACGCG TCAAGGCCGC GCTGGCGCTG GTGCACCTGG AGGCGCACGC CACGCGCTAC CCGCGCGAGC TGTCCGGCGG CCAGCGCCAG CGGGTGGCCC TGGCCCGCGC CCTGGTCATC GAGCCGCCGG TGCTGCTGCT CGACGAGCCG CTGTCCAACC TCGACGCCAA GCTGCGCGAG GAAATGCAGT TCGAGCTGCG GCAGATCCAG CGCAAGGTGG GCACCACCAC CGTGATGGTC ACGCACGACC AGACCGAGGC CATGTCCATC AGCGACCGCG TGGTGGTGAT GGAGGCCGGC CGCGTCACGC AGATCGACCA GCCGCACCGC CTGTACGAAC ACCCGCAAAC GCGTTTCATC TCCAGCTTTG TCGGCAAGGC CAACCTGCTG GAAGGCCGCG TCATCGCTAC CGGTGCCTGG GCCACGGTGG ACCTGGGCAC GGCGTCGCTG GAGGTCCATG CGCCCGGCGC CGCCGTGGGC GACGCCGTGG TGCTCAGCCT GCGGCCCGAA AAAATCCGCC TCGTGCCCGA GACCCGGGGT CGCCTCGCGG GCGCGGTGTG CGAGCGCTTC TTCCTGGGCA GCCAGTGGCT CTACCAGGTA GACACCGCCG CCGGTGAGCT GGTGGTGGTC TGCCCCAACG ATGGCGAAGT GCCTGCCGAA GAAGGCCAGC GCGTCGGCCT CGACTGGCCG GCCGGCCAGG TGCGCCTGTT GCCCGGCGCG CTGCATCTGC AAGTGCCTGC CGCACCGGCG ACGCTGGAGG CCGTGGCATG A
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Protein sequence | MSFLTLANVN KSYGATHAVI DMNLSVEKGE FVSLLGPSGC GKTTTLQMIA GFADVTAGRI TLDGRDITHA KPNTRGLGIV FQSYALFPHM SVHDNVSFGL EMRRMPKNER TERVKAALAL VHLEAHATRY PRELSGGQRQ RVALARALVI EPPVLLLDEP LSNLDAKLRE EMQFELRQIQ RKVGTTTVMV THDQTEAMSI SDRVVVMEAG RVTQIDQPHR LYEHPQTRFI SSFVGKANLL EGRVIATGAW ATVDLGTASL EVHAPGAAVG DAVVLSLRPE KIRLVPETRG RLAGAVCERF FLGSQWLYQV DTAAGELVVV CPNDGEVPAE EGQRVGLDWP AGQVRLLPGA LHLQVPAAPA TLEAVA
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