| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3898 |
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| Symbol | |
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| ID | 4013422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4091078 |
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| End bp | 4094089 |
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| Gene Length | 3012 bp |
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| Protein Length | 1003 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637943549 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_550692 |
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| Protein GI | 91789740 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.504038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0804481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACA AAAACGTAGC GGACACCAAC TCCAACGCCG TCAACGTGCC GGGCGCCGCC
GCCCCTGTCG GCGCGCCTCC CAGGGACCTG TTTACCGGCG GCGGCGAAAT GGGTGCGATC
ATGCGCGCGA CGGACTGGTC CAAGACGAAG CTCGGCCCGA TTGAAGCCTG GCCGAACAGT
CTCAGAACCA TGCTGGGCGT CGTACTCGGC AGCCGGTTTC CCATGCTGCT CTGGTGGGGC
CCCGATCTCC TGCACCTCTA CAACGACGCA TACCGCCCCA TTCTGAGGGA CAAGCACCCC
GCGTCGCTCG CCGCTCCAGC CGCGGAGATG TGGGCCGAGG TCTGGGACGT TGCCGGGCCC
ATGGCAAGGA GCGTCCAGGA AGGAGGCCCG GCGACATGGA CGGAGGACCT TCAGCTGTTC
ATTAACAGCG GGGCCATGGT CGAGGAAACG TACTTCACGT TTTCGTACAG CCCCGTCCCA
GGCGATGACG GGCGCGTCGG CGGCCTGCTC AACACGGTGC AGGAAACGAC AGTGAAGGTG
CAGGGCGAAC GCCAGATCCG GATGCTGCAC GAATTGGCCG CGCGGGCGGC CGAAGCAAAA
TCCGAGAACG AAGCGTACCG GATTGCCGCG GAGGTCCTTT CGGCCAACGA ACTGGATCTC
CCGTTTGTGC TGCTCTATGT TCTGAACGAG ACGGCTTCCG ACGCTGAACT CGTCGCCGTG
AGCGGCTGGA AGGAGTATGA AGGCCGCGCC AGGCCCGCGC ATGTGCCGGT CAAGGAGGGT
GCAAGTACAG CTTCCTGGCC CTTTGCTGAA GTCATTCGAA CCGCTCAGGA ACTCGTCGTC
GACGACCTCT CGTCGCGCTT CGGGCCGCTG CCGGCGGGTC GCTGGAACGC ACGGCCCGAA
CGAGCTATCG TCCTGCCGCT TTCGCGGACA GGCCAGTCCG AGCCTTATGG GTTTCTCGTT
GCCGGCATCA GCCCGCACCG TGCATTCGAA GACCGGTATC GAAGGTTCTT TCGGGCTACC
GCGGATCAGG TGGCGACCGT CATCGCCAAT GCCCGTGCCT ACGAGGCAGA AAAGACGCGG
GCCGAGGCCC TGACCGAGAC CGATCGGGCC AAGACCGCCT TCTTCAGCAA CGTCAGCCAC
GAGTTCAGGA CCCCCCTCAC GCTCCTGCTC GGACCGCTGG AGACGCTGCT TGCCGAGCGC
GAGCTTGGTG CCGAGGCGCG GGATCGGCTG CTCCAGATGC AGCGCAACGC GTTGCGCCTG
CTGCGCCTGG TGAATGCGCT GCTCGATTTC TCGCGCATGG AGGCCGGGCG GCACTCCGCG
CGGTTCGCGC CGACCGACCT CGCACGCTAC ACCGCGGATC TGGCGAGCGC GTTTCGCTCG
GCCATGGAAA AAGCCGGGCT CTCCTTTGCG GTGGAATGCC CGCCGTTGCC GGCGCCGATC
TACGTCGACC GCGACATGTG GGAGAAGATC GTCATGAATC TCCTCTCCAA TGCGCTCAAG
TTCACTTTCG AGGGCGGGGT GAGCCTGCGC CTTGTTGCGG CGGATGGCGG CGCGCACCTG
ACGGTGAAGG ACACGGGCTC GGGCATCCCC AGGAGCGAAC TGCCGAAACT CTTTCAGCGG
TTCCACCGGG TGGAGGGCGC GCGCGCTCGC TCGCACGAAG GCACGGGCAT CGGGCTTGCG
CTGGTCCATG AGCTCGTCAA GCTGCACGGC GGCGAGATCC GCGTCGCGAG CGACGAAGGC
CAGGGTGCGG AATTCACGAT CACGCTGCGC GGCGGGCGCA ACCACCTGCC GCCGGAGCAT
GTCGTAGCAG AGTCCCCGGA GGCCGCATCG GTGGCGAGAA GCGCGTCGGC CTATCTCGAC
GAGGCGCTGC AATGGCTGCC TTATGAGTCG CAGCCGATCG CCTCCGCTCC GGCAAGGAGC
GGTGCTCGCG TGCTCGTCGC CGACGACAAC CGTGACCTGC GGACCTTCCT CTCGAGCCTA
CTTGCGCCGC ATTACGACGT GCAGGTGGTG GCCGACGGCC GCGAAGCGCT CGCCGCCATT
CAGCAGAGAA AACCGGACCT CGTGCTGAGC GACGTGATGA TGCCGAACCT CGACGGCCTG
GGCCTGGTGC GGGCGCTGCG CGAGGATCCC GAAACGCGCA CGCTGCCGGT GATTTTGCTG
TCGGCGCGCG CGGGTCAGGA AGCCTCGCTC GAAGGCCTTT CCGCCGGCGC GGACGACTAT
CTCGCCAAGC CGTTCACGTC CCAGGAACTG CTCGCGCGGG TGCGCACGCA CCTCACCATG
GCACGAGCGC GCGATGAGCT GAACACGGAG CTCATGCACG CCAACGAGGA ACTGGAAGCG
TTCAGCTACT CCGTGTCCCA TGACTTGCGG GCGCCGCTGC GTGCAGTCAA CGGATACACG
CATCTGCTCG AGGAGGGCTA CGCGACGCAG CTCGACGACG AAGGACGGCG GTTTCTTCGC
GTGGTGCGGG AGGAAGCCGG CCGGATGGGG CAGCTGATCG ACGACCTGCT CAATCTCTCG
CGGATCGCGA GAGCACAGCT CAGCCGGGAC CCGGTCGATC TCTCCGCGCT TGCCCTGGCC
GCCGGCGAAG AGCTGCAGCG CAAGGAACCC GAACGGCGGG TCAGCCTGCT GATCCAGGAA
GGCCTCGTCG CCGGGGTGGA TCGCCAGCTA TTGCGCATTC TGTTTGACAA TCTTCTCGGC
AACGCGTGGA AATTCACGGT CAAGACCGGT GAACCGAGGA TCGCGTTCGG AACGGAACAG
CGCAATGGCA GCGAGGTATT TGTGGTGCGC GACAACGGAG CCGGCTTTGA CATGGCTTAC
GCCAGCAAGC TGTTTCGGCC CTTTCAGCGA CTCCACACCG AGAGCGAATT CCCTGGAACG
GGGATCGGGC TCGCAACCGT TCGCCGGATC GTCGAACGCC ACGGCGGCCG CGTGTGGGCA
GAGGGCGCGC CAGGGCGCGG CGCGGCCGTC TTCTTCACGC TCCCGCCCGC GGCAATGGAA
GGCCGGAGGT GA
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| Protein sequence | MTDKNVADTN SNAVNVPGAA APVGAPPRDL FTGGGEMGAI MRATDWSKTK LGPIEAWPNS
LRTMLGVVLG SRFPMLLWWG PDLLHLYNDA YRPILRDKHP ASLAAPAAEM WAEVWDVAGP
MARSVQEGGP ATWTEDLQLF INSGAMVEET YFTFSYSPVP GDDGRVGGLL NTVQETTVKV
QGERQIRMLH ELAARAAEAK SENEAYRIAA EVLSANELDL PFVLLYVLNE TASDAELVAV
SGWKEYEGRA RPAHVPVKEG ASTASWPFAE VIRTAQELVV DDLSSRFGPL PAGRWNARPE
RAIVLPLSRT GQSEPYGFLV AGISPHRAFE DRYRRFFRAT ADQVATVIAN ARAYEAEKTR
AEALTETDRA KTAFFSNVSH EFRTPLTLLL GPLETLLAER ELGAEARDRL LQMQRNALRL
LRLVNALLDF SRMEAGRHSA RFAPTDLARY TADLASAFRS AMEKAGLSFA VECPPLPAPI
YVDRDMWEKI VMNLLSNALK FTFEGGVSLR LVAADGGAHL TVKDTGSGIP RSELPKLFQR
FHRVEGARAR SHEGTGIGLA LVHELVKLHG GEIRVASDEG QGAEFTITLR GGRNHLPPEH
VVAESPEAAS VARSASAYLD EALQWLPYES QPIASAPARS GARVLVADDN RDLRTFLSSL
LAPHYDVQVV ADGREALAAI QQRKPDLVLS DVMMPNLDGL GLVRALREDP ETRTLPVILL
SARAGQEASL EGLSAGADDY LAKPFTSQEL LARVRTHLTM ARARDELNTE LMHANEELEA
FSYSVSHDLR APLRAVNGYT HLLEEGYATQ LDDEGRRFLR VVREEAGRMG QLIDDLLNLS
RIARAQLSRD PVDLSALALA AGEELQRKEP ERRVSLLIQE GLVAGVDRQL LRILFDNLLG
NAWKFTVKTG EPRIAFGTEQ RNGSEVFVVR DNGAGFDMAY ASKLFRPFQR LHTESEFPGT
GIGLATVRRI VERHGGRVWA EGAPGRGAAV FFTLPPAAME GRR
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