Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3831 |
Symbol | |
ID | 4013511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 4019417 |
End bp | 4022119 |
Gene Length | 2703 bp |
Protein Length | 900 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637943484 |
Product | 2-oxoacid dehydrogenase subunit E1 |
Protein accession | YP_550627 |
Protein GI | 91789675 |
COG category | [C] Energy production and conversion |
COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type [TIGR03186] alpha-ketoglutarate dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGATT CCACCCCCCA CCATCTCCTG ATGCAAACCG CCGACGCTTT CACGCCAGAC CCTGACCCAC AGGAAACCGC GGAGTGGCGC GAGGCGTTTG AAGCCCTGGC AGCCACGCAG GGCCCGGCCC GCGCGCGGCA CATGCTGGAC GAGCTGAGCC GCGTTGCCCG CAACCGCCGC ATCGGCTGGC AGCCCGAGCT GTCCACGCCC TACATGAACA CCATCGGCGT GAACGAGCAG CCAGTCTTTC CCGGCGATCT GGCGCTGGAG GAACGGCTGG CTTCGCTGAT GCGCTGGAAC GCGCTGGCCA TGGTGGTGCG CGCCAACCAG GCCGAGCTTG GCGGCTCCAG CGAACTGGGC GGCCACATTG CCAGCTACGC CAGCGCCGCC GATTTGTTTG AAACCGGCTT CAACCATTTC TTTCATGCGC GCGAAGGCAC GGGCGAAATT GACGGTGTCA AGCAGCATCG CGGCGACCTG GTGTTCTTCC AGCCGCACAG CGCGCCCGGT GTGTATGCGC GCGCCTACCT CGAAGGCCGG CTCACTGAAA AGGACTTGAG CTTTTACCGC CAGGAACTCA CCGCACCCGG CCAGGGTGCG CAAGGCCTGT CCAGCTACCC CCACCCCTAC CTGATGCCCG GGTTCTGGCA GTTCCCGACA GGCTCCATGG GCATAGGCCC GATCAGCTCG ATCTACCATG CGCGCTTCAT GCGCTACCTC ACGCACCGGC GGCTGCTCGA CTGCAGCGGC CGCAAGGTCT GGGGCGTGTT CGGCGACGGC GAGATGGACG AGCCCGAGTC CATGAGCGCC CTCACCCTGG CAGCACGCGA AGGGCTGGAC AACCTGGTCT GGGTCGTCAA CTGCAATCTG CAGCGGCTCG ACGGCCCTGT GCGCGGCAAC GGCCGCATCA TCGACGAGCT GGAAAAGCTC TTTGCCGGCG CAGGCTGGAA CGTCATCAAG CTGGTCTGGG GCAGCGACTG GGACGGCCTG TTTGCGCGCG ACCTGACCGG CGCGCTGACG CAGGCCTTTG CCCACACGGT GGACGGCCAG ATGCAGACCT TTGCCGCCAA GGACGGCCGC TTTAACCGCG ACAACTTCTT CGGACAGAAC GAGGAACTGG CCCGACTGGC CCAGGGCATG ACCGACGAAC AGATCGACCG CCTCAAGCGC GGCGGCCACG ACCTGGTGAA AATCCATGCG GCCTATGCAG CGGCGGCCAA CCACAAAGGC CAGCCCACGG TGATCCTGGC GCACACCAAA AAAGGCTATG GCATGGGCAG CGCCGGCCAG GGCAAGATGA CCACGCATTC GCAAAAGAAA TTTGACGAGA CCGATCTTCT GGAGTTTCGC AACCGCTTCA ATTTGCCCTT GACCGACGAG CAGGCCAAAC ACATCGCGTT TTACAAGCCC GCCGATGACA GCCCCGAGAT GCGCTACATG CACGCGCAGC GTGCGGCCCT GGGTGGCTAC CTGCCCAAAC GCGACACCAC GGCCGAGGTG ATTCCTGTAC CGGCCTTGCC AAGTTACGCC CAGTTTGCGC TTGGTGCTGC AGCCAAGGAA ATGAGCACCA CCATGGCCTT TGTGCGCATG CTGGGCAGCC TGCTGAAGGA CCCGGCCCTG GGCCCGAAGA TCGTGCCCAT CGTGGCGGAC GAAGCGCGCA CCTTCGGCAT GGCCAACCTG TTCAAGCAGG TCGGCATTTA CTCCAGTGTG GGCCAGCGCT ACGCACCCGA AGACATCGGC TCGGTGCTGA GCTACCGCGA GGCCCTTGAC GGGCAGATTC TGGAAGAGGG CATCAGCGAA GCCGGGGCAC TCGCCAGCTG GACGGCCGCG GCCACCAGCT ACAGCGTCCA CGGCTTGGCC ATGCTGCCGT TTTATATCTA TTACTCGATG TTCGGCTTCC AGCGCGTCGG CGACCAGATC TGGGCCGCAG CCGACCAGCG GGCGCGCGGC TTCCTGCTGG GCGCCACTTC AGGCCGCACC ACGCTGGGCG GCGAAGGCCT GCAGCACCAG GACGGCTCCA GCCACCTGAT CGCCGCCACC ATTCCCAACT GCAAGGCCTA TGACCCGGCC TTTGCCTGCG AGCTGGCCGT CATCATCGAC CGGGGCATGC GCGAGATGAT GGTGGAGCAA AAAGACGTGT TCTATTACGT CACGATGATG AACGAGAACT ACGCCCAGCC AGATCTGCGG CCGGGGTCGG AGGCGGACAT CATTCGCGGA TGCTATCAAT TCAATAGCTA TCAAGGTCCG GCAAGCGAAG GGAAATCAGC CAAAAATCCA CAACATGTGA CGCTGATGGG TTCAGGGGCC ATCCTGACCG AGGTGATCAA GGCGGCGCAG CAACTGGCAG ACCAGGGCAT TCATGCCACC GTTTACAGCG TGACCAGCTG GAGCGAGCTC GCACGCGATG GCGCGGCTTG CCAGCAGCGG ATGCTGAACG GCGAAGGAAT GACCGAAGGC GCAAAGACTG ACGCGTTCAT CAGGCAGCAA CTGCACGCCA GCCAGGGGCC CATCATTGCC GCCACCGACT ACGTGCGTGC CGTGCCCGAG AGCATTCGCG CTTTCCTGCC CGAAGGCCGC GCCTACCTGA CGCTGGGCAC CGACGGCTTC GGCCGCAGCG ACACGCGGGC CGCCTTGCGC GAATTTTTTG GCGTCAATGC ACAAAGCATC GTCAACGCGG CACGGCATCT GCTGAAGGCT TGA
|
Protein sequence | MNDSTPHHLL MQTADAFTPD PDPQETAEWR EAFEALAATQ GPARARHMLD ELSRVARNRR IGWQPELSTP YMNTIGVNEQ PVFPGDLALE ERLASLMRWN ALAMVVRANQ AELGGSSELG GHIASYASAA DLFETGFNHF FHAREGTGEI DGVKQHRGDL VFFQPHSAPG VYARAYLEGR LTEKDLSFYR QELTAPGQGA QGLSSYPHPY LMPGFWQFPT GSMGIGPISS IYHARFMRYL THRRLLDCSG RKVWGVFGDG EMDEPESMSA LTLAAREGLD NLVWVVNCNL QRLDGPVRGN GRIIDELEKL FAGAGWNVIK LVWGSDWDGL FARDLTGALT QAFAHTVDGQ MQTFAAKDGR FNRDNFFGQN EELARLAQGM TDEQIDRLKR GGHDLVKIHA AYAAAANHKG QPTVILAHTK KGYGMGSAGQ GKMTTHSQKK FDETDLLEFR NRFNLPLTDE QAKHIAFYKP ADDSPEMRYM HAQRAALGGY LPKRDTTAEV IPVPALPSYA QFALGAAAKE MSTTMAFVRM LGSLLKDPAL GPKIVPIVAD EARTFGMANL FKQVGIYSSV GQRYAPEDIG SVLSYREALD GQILEEGISE AGALASWTAA ATSYSVHGLA MLPFYIYYSM FGFQRVGDQI WAAADQRARG FLLGATSGRT TLGGEGLQHQ DGSSHLIAAT IPNCKAYDPA FACELAVIID RGMREMMVEQ KDVFYYVTMM NENYAQPDLR PGSEADIIRG CYQFNSYQGP ASEGKSAKNP QHVTLMGSGA ILTEVIKAAQ QLADQGIHAT VYSVTSWSEL ARDGAACQQR MLNGEGMTEG AKTDAFIRQQ LHASQGPIIA ATDYVRAVPE SIRAFLPEGR AYLTLGTDGF GRSDTRAALR EFFGVNAQSI VNAARHLLKA
|
| |