| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3725 |
|---|
| Symbol | |
|---|
| ID | 4013598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3932698 |
|---|
| End bp | 3933231 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637943379 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_550523 |
|---|
| Protein GI | 91789571 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.962326 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACACG AATTCCGTTT TTGCCCCCAA TGTGCGACGC CGCTGGCCAT GGTGGTGCAA
ATGGAGGACA GTGGGGAGAA GGCGCGCCTG CGCTGCCCGG CCTGCAATTA CACCCACTGG
AACAATCCCA CGCCCGTGCT GGCGGCGGTG GTCGAATACC AGGGGCAGAT TTTGCTGGCG
CGCAATGCGG CCTGGTCCGG CAAGATGTAC GCGCTGATCA CTGGCTTCAT GGAGGCCGGT
GAAACCCCGC AGGAAGGCAT CCAGCGCGAA ATCAAGGAAG AAACCAACCT GGATACCACC
GCGCTGGACC TGATCGGGGT CTACGACTTT CAGCGCATGA ACCAGATCAT CATCGCCTAC
CACGCCGTCT GCCACGGCGA CGTCAGGTTG TCGCCGGAAC TGGTGGATTA CCGGTTATAC
GATTTTGACA AACTCAAGTG CTGGCCCGCC GGCACCGGCT ATGCGCTGGC CGACTGGCTG
CGCACGCGTG GCTATGAGCC GGAGTTTCTG GCGTGGGACA AAAGGACGGA GTGA
|
|---|
| Protein sequence | MTHEFRFCPQ CATPLAMVVQ MEDSGEKARL RCPACNYTHW NNPTPVLAAV VEYQGQILLA
RNAAWSGKMY ALITGFMEAG ETPQEGIQRE IKEETNLDTT ALDLIGVYDF QRMNQIIIAY
HAVCHGDVRL SPELVDYRLY DFDKLKCWPA GTGYALADWL RTRGYEPEFL AWDKRTE
|
|---|
| |