Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3614 |
Symbol | truA |
ID | 4013721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 3817322 |
End bp | 3818116 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637943273 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_550417 |
Protein GI | 91789465 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.421656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.842605 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGATTG CGCTCGGTAT CAGCTACAGC GGCAGCGCTT ATGAAGGCTG GCAAAGCCAG CTTTCAGGCA ATACGGTACA GGACAAACTG GAATCGGCAT TGGCCAGGTT TGCCGCTCAG CCCGTGCGCA CCCTGTGCGC CGGCCGCACC GATGCCGGCG TTCACGGGCT GATGCAGGTC GTGCACTTTG ACACCGTCCT GCACCGTGAC ATGGGGTCAT GGGTACGCGG CACCAACGCC TTTTTGCCTT CCGACATCGC GGTGCAGTGG GCGCGCGAAG TTCCCGATAC GTTTCATTGC CGGGGCAGTG CCATTGCACG CCGCTACGCC TACGTGGTGC TGGAATCACC CGTGCGACCC AGCGTGGAGG CCGGACGTGT CGGCTGGGTC TACCGGCCGC TGGACGGTGC AGCGATGCGG CAGGCCATCA CGCACCTGGT TGGCGAACAT GACTTCAGCT CCTTTCGGGC GGCGCAATGC CAGGCCAAAT CGCCCGTCAA AACCATCAAC CGGATCGAAA TTTCGGAGCG TGCCGGTACC GGTTCAAAGT ACTGGCACTT CGAGTTCGAA GCCAACGCCT TTTTGCACCA CATGATCCGC AACATCATGG GCTGCCTGGT CGCCATAGGT CAAGGCAGCC ATGAGCCTGG CTGGCTGCTG GACGTGATGG CCGCACGCAG CCGGGATGCC GCCGCCCCCA CCTTTTCACC CAACGGCCTC TATTTCCTGG GGCCAGTCTA TGAAGACCAC TATGGCCTGC CAAATCGCAC GGCGGCTTAT GATTGGTTGC CATGA
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Protein sequence | MRIALGISYS GSAYEGWQSQ LSGNTVQDKL ESALARFAAQ PVRTLCAGRT DAGVHGLMQV VHFDTVLHRD MGSWVRGTNA FLPSDIAVQW AREVPDTFHC RGSAIARRYA YVVLESPVRP SVEAGRVGWV YRPLDGAAMR QAITHLVGEH DFSSFRAAQC QAKSPVKTIN RIEISERAGT GSKYWHFEFE ANAFLHHMIR NIMGCLVAIG QGSHEPGWLL DVMAARSRDA AAPTFSPNGL YFLGPVYEDH YGLPNRTAAY DWLP
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