Gene Bpro_3614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3614 
SymboltruA 
ID4013721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3817322 
End bp3818116 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content62% 
IMG OID637943273 
ProducttRNA pseudouridine synthase A 
Protein accessionYP_550417 
Protein GI91789465 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0101] Pseudouridylate synthase 
TIGRFAM ID[TIGR00071] pseudouridylate synthase I 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.421656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.842605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGATTG CGCTCGGTAT CAGCTACAGC GGCAGCGCTT ATGAAGGCTG GCAAAGCCAG 
CTTTCAGGCA ATACGGTACA GGACAAACTG GAATCGGCAT TGGCCAGGTT TGCCGCTCAG
CCCGTGCGCA CCCTGTGCGC CGGCCGCACC GATGCCGGCG TTCACGGGCT GATGCAGGTC
GTGCACTTTG ACACCGTCCT GCACCGTGAC ATGGGGTCAT GGGTACGCGG CACCAACGCC
TTTTTGCCTT CCGACATCGC GGTGCAGTGG GCGCGCGAAG TTCCCGATAC GTTTCATTGC
CGGGGCAGTG CCATTGCACG CCGCTACGCC TACGTGGTGC TGGAATCACC CGTGCGACCC
AGCGTGGAGG CCGGACGTGT CGGCTGGGTC TACCGGCCGC TGGACGGTGC AGCGATGCGG
CAGGCCATCA CGCACCTGGT TGGCGAACAT GACTTCAGCT CCTTTCGGGC GGCGCAATGC
CAGGCCAAAT CGCCCGTCAA AACCATCAAC CGGATCGAAA TTTCGGAGCG TGCCGGTACC
GGTTCAAAGT ACTGGCACTT CGAGTTCGAA GCCAACGCCT TTTTGCACCA CATGATCCGC
AACATCATGG GCTGCCTGGT CGCCATAGGT CAAGGCAGCC ATGAGCCTGG CTGGCTGCTG
GACGTGATGG CCGCACGCAG CCGGGATGCC GCCGCCCCCA CCTTTTCACC CAACGGCCTC
TATTTCCTGG GGCCAGTCTA TGAAGACCAC TATGGCCTGC CAAATCGCAC GGCGGCTTAT
GATTGGTTGC CATGA
 
Protein sequence
MRIALGISYS GSAYEGWQSQ LSGNTVQDKL ESALARFAAQ PVRTLCAGRT DAGVHGLMQV 
VHFDTVLHRD MGSWVRGTNA FLPSDIAVQW AREVPDTFHC RGSAIARRYA YVVLESPVRP
SVEAGRVGWV YRPLDGAAMR QAITHLVGEH DFSSFRAAQC QAKSPVKTIN RIEISERAGT
GSKYWHFEFE ANAFLHHMIR NIMGCLVAIG QGSHEPGWLL DVMAARSRDA AAPTFSPNGL
YFLGPVYEDH YGLPNRTAAY DWLP