| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3613 |
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| Symbol | |
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| ID | 4013720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 3814589 |
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| End bp | 3817258 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637943272 |
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| Product | putative transmembrane protein |
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| Protein accession | YP_550416 |
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| Protein GI | 91789464 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3170] Tfp pilus assembly protein FimV |
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| TIGRFAM ID | [TIGR03504] FimV C-terminal domain
[TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCATC GTGGTCGTTG GCGTATTGGT GCTCTGGCGA GCGCTATTGC ATTGCTGGGT
AGCCTGGCAA GTCTGGAAGC ACATGCCCTG GCGTTGGGCC GAATAACGGT TCAATCGGCG
CTGGGGGAAC CCCTTCGCGC AGAAATCGAC ATTGCAGACA TCACTGCAGA CGAGGCCTCC
AGCCTAAAGG CCGGCGTCGC ATCTGCCGAC ACCTTCAAGG CAGCGGGGCT TGAGTACACC
GCCGCGCTGT CGGGCCTGCA GATTAACCTG CAACGCCGCA CCGATGGCCG GGCTTATTTG
CGCCTGACCA GCAGCCGACC CGTGAACGAG CCCTTTGTCG ACCTGATTCT GGAAGCCAGC
TGGGCATCCG GGCGGATCAC CCGCGACTAC ACCATGCTGT TTGACCCGCC CAACCTGCGG
TCCGCAGGCC CGGCTGTAGC GCCAACCGCG CCCCAATTGT CACGGCCAGT CCCGCCCACC
GCCGCAGCGC CAGCCAGGAC GGCGACGCCT GCACCTTCCA CACCGCCAGC CCCACCCGTG
GCCAAAGCCG CGCCGGCTGA CAAGGCCCCC GCGAGCGACA AACAGCTCAC GGTCAAGACC
GGAGACACCG CAGGGCGAAT CGCAGCGGAG AACAAGCCGG CCAGCGTGTC GCTGGACCAG
ATGCTGGTGG CCTTGCTCAG GAGCAATCCA AACGCATTTA TTGGCGGCAA CGTCAACCGG
CTCAAATCCG GCGCCGTGCT GGAAATGCCC AGCGACGAAG CTGCCAGCGC CATCCCTCCC
CGCGAAGCCA CGCAAACCAT CGTGGCCCAA AGCAGGGATT TCAATAACTT CCGGCGCAAG
CTCGCCGAAA GCGTGCCAGC CGCTCAGGTG GCCAGCGCGG ACCGGCAGGC TGGCGGAAAA
GTGCAGGCCA AGGTCGAGGA TCGCACCCCG GCAAACACCA CCCCCGACAA GTTGACGCTG
TCCAAAGGTG CGGTTCAGGG CAAAGCAGCA ACCGAAGACA AGATTGCCAA AGACAGGCAA
GCCCAGGATG CCTCTGCCCG CGTGGCGGAG CTGTCAAAAA ACATCAGCGA TCTCAACAAG
CTGGGTGTTG CCCCCGCTCC GGTGGCAACC GCCAGCGCCG CCAAGGCGCC CGGCGTCGCC
TTACCCGCAC CGTCGGGCCT TGCGGCACCG GCACCTGCAC CTGTGCCCCC TGCGGCTGCA
GCGGCCAATT CAGCCCAGCC TGGCACCGCC GGCAGCCCCG TATCAACACC AGCGGCTCCA
GCCTCTGCAG CCATCGCGGT CCCGGCCATC CCCGCTGCCA GTGCAGCCGC GGCGGCGCCT
ATCGCCCCGG CCTCTGCAGC CGATGCATCG CCCCCGGTCG CCGCAGCTGT CCCCCCCAAG
AAACCCGTGG TGGTCGCTCC TCCACCCCCG GAACCCAGTC TGATGGACGG TTTGCTGGAG
AACCCGCTGA CCCTGCCGCT GGCCGGTGGC TTGCTGGCCC TGCTGGCCGG TTTCGGTTTT
TACCGCTACC GCCAGCGCAG CAACCCGGCG CAGGTGGACA GTTCCTTCCT CGAGAGCCGC
CTGCAGCCCG ACTCCTTTTT CGGCGCCAGC GGTGGCCAGC GCATCGATAC CAACGAGGGA
AACGCCACAG GCTCGTCCCT CGTTTACTCG CCCAGCCAGC TCGATGCCGC CGGCGATGTG
GACCCGGTGG CCGAGGCCGA TGTCTACCTG GCCTATGGGC GCGACTTGCA GGCTGAGGAA
ATCCTCAAGG AAGCCATGCG CACCAGCCCG ACCCGCGTGG CCATCCATGC CAAACTGATG
GAAATTTATG CCAAGCGTCG CGACACCAAG GCCTTCGAGG CGGTGGCGGT CGAGGCCTTT
AACCTGACGC AGGGCAGTGG CCCGGACTGG GCGTATATCA GCGAAATGGG CCGTGAACTC
GACCCGGCCA ACCCGATGTA CCAGCCCGGT GGACAACCCG TGGCCGCGGG CAAGGGCGGC
GGCGCAGCCG CTTTCAGTGC GGCCTCCGCC ACAGTCGCCA GAAATGCCCC GCCAGCGCAT
GCCGCCCCCG TGGCGCCAGT GGTGGATGTC GACCTCGATC TGGATTTCTC GCTGGGCGAT
GCGGAAGACG CGGCGACCAT CCCCGTCGCC CCGCCCACCC CGCCCGTGCG ATCAGCGCCC
CCTCGGCCGC CTGAGCCGCC TGTCGCCGCG AAACCCGCAC CGGCACCGGC CCTGGCTGAC
CTGGACATGG ATTTCGGCAG CGCGACCGTC TCGCTGCCCG AGATAGCGAC CCCTGCACCG
GCATCAAAGC CTGCTGCAGC ACCGGCCATC GAAATGGATT TCCCCTCCGC AGGGCTGAAC
TTCACACCCG AGCCCACTGC CTCATCGAAG CCGGTCCTGG CCACCAGGGC CGCCACCGCA
CCTGCGCCGG CGTCCTCCGA CAGTGGCATG CTGGAGTTTG ACCTCGGCTC ACTGTCGCTG
GACCTGGACG ACGGCCCTGC AACTGAAAGC CCGGTGCATG CCCAAGCAGC CACGTCCAGC
GACCCGCTGG AAACCAAATT CCAGCTGGCT GAAGAATTCC GTTCCCTGGG CGACCCGGAC
GGCGCAAGGT CTCTGGCCGA AGAAGTGCTG GCAGAAGCCA AAGGGCCGCT GAAGGTCAAA
GCGCAGGCGT TCCTCAACGC CCTCGCGTGA
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| Protein sequence | MNHRGRWRIG ALASAIALLG SLASLEAHAL ALGRITVQSA LGEPLRAEID IADITADEAS
SLKAGVASAD TFKAAGLEYT AALSGLQINL QRRTDGRAYL RLTSSRPVNE PFVDLILEAS
WASGRITRDY TMLFDPPNLR SAGPAVAPTA PQLSRPVPPT AAAPARTATP APSTPPAPPV
AKAAPADKAP ASDKQLTVKT GDTAGRIAAE NKPASVSLDQ MLVALLRSNP NAFIGGNVNR
LKSGAVLEMP SDEAASAIPP REATQTIVAQ SRDFNNFRRK LAESVPAAQV ASADRQAGGK
VQAKVEDRTP ANTTPDKLTL SKGAVQGKAA TEDKIAKDRQ AQDASARVAE LSKNISDLNK
LGVAPAPVAT ASAAKAPGVA LPAPSGLAAP APAPVPPAAA AANSAQPGTA GSPVSTPAAP
ASAAIAVPAI PAASAAAAAP IAPASAADAS PPVAAAVPPK KPVVVAPPPP EPSLMDGLLE
NPLTLPLAGG LLALLAGFGF YRYRQRSNPA QVDSSFLESR LQPDSFFGAS GGQRIDTNEG
NATGSSLVYS PSQLDAAGDV DPVAEADVYL AYGRDLQAEE ILKEAMRTSP TRVAIHAKLM
EIYAKRRDTK AFEAVAVEAF NLTQGSGPDW AYISEMGREL DPANPMYQPG GQPVAAGKGG
GAAAFSAASA TVARNAPPAH AAPVAPVVDV DLDLDFSLGD AEDAATIPVA PPTPPVRSAP
PRPPEPPVAA KPAPAPALAD LDMDFGSATV SLPEIATPAP ASKPAAAPAI EMDFPSAGLN
FTPEPTASSK PVLATRAATA PAPASSDSGM LEFDLGSLSL DLDDGPATES PVHAQAATSS
DPLETKFQLA EEFRSLGDPD GARSLAEEVL AEAKGPLKVK AQAFLNALA
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