| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3602 |
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| Symbol | |
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| ID | 4013748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 3803345 |
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| End bp | 3805141 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637943261 |
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| Product | succinate dehydrogenase subunit A |
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| Protein accession | YP_550405 |
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| Protein GI | 91789453 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.229588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTA CCTCCAAACT CCCCAAGCGT AAATTTGACG TTGTGATCGT CGGTGCCGGC
GGCTCCGGCA TGCGCGCTTC GCTGCAGCTC GCACGCGCCG GCCTGAACGT GGCCGTGCTG
TCCAAGGTGT TCCCCACGCG CTCCCATACG GTGGCCGCAC AAGGCGGCAT TGGCGCCTCG
CTCGGCAACA TGTCGGAAGA CAACTGGCAC TATCACTTCT TCGACACCGT CAAGGGTTCC
GACTGGCTCG GCGACCAGGA CGCGATTGAA TACATGTGCC GTGAAGCACC CAAGGTGGTG
TACGACCTCG AACACATGGG CATGCCGTTC GACCGCAACC CGGATGGCAC GATTTACCAG
CGCCCCTTCG GCGGCCATAC CGCCAACTAC GGCGAAAAGC CGGTGCAGCG CGCCTGCGCC
GCTGCCGATC GCACCGGCCA CGCCATGCTG CACACGCTGT ACCAGCAAAA CGTCAAGGAA
AAAACCAGCT TCTTCGTGGA ATGGCTGGCC ATGGACCTGA TCCGCGACGC CGATGGCGAT
GTCGTGGGCG TGACCGCACT GGAAATGGAA ACCGGTGACG TGCATATCTT CGAAGCCAAG
ACCACCCTGC TAGCCACCGG TGGCGCCGGC CGCATTTTTG CCGCATCCAC CAACGCGTTC
ATCAACACCG GCGACGGCCT GGGCATGGCC GCGCGTGCCG GCATCCCGCT GGAAGACATG
GAGTTCTGGC AGTTCCACCC CACCGGCGTG CATGGCGCCG GCGTGCTGCT GACCGAGGGC
TGCCGCGGCG AAGGCGCCAT TTTGCGCAAC AGCAACGGCG AACGCTTCAT GGAGCGCTAT
GCGCCCGCCT ACAAGGATCT GGCGCCGCGT GACTACGTAT CGCGCTGCAT GGATCAGGAA
ATCAAGGAAG GTCGCGGCTG CGGTCCCAAC AAGGACTACA TCAATCTTGA CATGACCCAC
CTGGGCGCCG AGACCATCAT GAAGCGCCTG CCGTCGGTGT TCGAGATTGG CCACAACTTT
GCCAACGTCG ACATCACCAA GGAGCCAATC CCCGTGGTGC CCACCATCCA CTACCAGATG
GGCGGCATTC CGACCAACAT CCATGGCCAG GTGGTCACGC AGAACGCCGA CAACAAGAGC
GAAGTCGTCA ACGGCCTCTA TGCCGTGGGC GAATGCTCCT GCGTCAGCGT GCACGGCGCC
AACCGCCTGG GCACCAATTC GCTGCTGGAC CTGCTGGTGT TCGGCCGCGC TGCCGGCAAC
CACATTGTTG AATTCAACAA CGCCAACAAA ATGCACAAAC CGCTGCCAGC CGACGCGGCC
GACCTGACGC TGGCGCGTAT CGCACGGCTG GACAACGCGA GTGGCGGCGA GTATGCCCAG
GATGTGGCCA ACGACATCCG CACGGCCATG CAGACGCATG CCGGCGTGTT CCGCACCCAG
GCCCTGATGG ACGAGGGCGT CACCAAAATC GCGGCCTTGC GCGAACGTGT GAAGAACATC
GGCCTGAAGG ACAAGTCAAA AATCTTCAAC ACCGCACGCA TCGAAGCACT GGAAGTGGAA
AACCTGATCG AGGCGGCAGA GGCCACCATC GTGTCGGCCG CTGCCCGCCA TGAAAGCCGG
GGCGCGCACT CGGTTGATGA CTACGGCGAT ACGCCAGAGC ATCCCAATGG CCGCAACGAC
ACCGACTGGC ACAAGCACAC GCTGTGGCAC AGCGAGGGCA GCCGCCTGAG CTACAAGCCC
GTGCAGATGA AGCCGCTGAC GGTTGAGTCC GTGCCGCTCA AAGTGCGCAG CTTCTAA
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| Protein sequence | MTATSKLPKR KFDVVIVGAG GSGMRASLQL ARAGLNVAVL SKVFPTRSHT VAAQGGIGAS
LGNMSEDNWH YHFFDTVKGS DWLGDQDAIE YMCREAPKVV YDLEHMGMPF DRNPDGTIYQ
RPFGGHTANY GEKPVQRACA AADRTGHAML HTLYQQNVKE KTSFFVEWLA MDLIRDADGD
VVGVTALEME TGDVHIFEAK TTLLATGGAG RIFAASTNAF INTGDGLGMA ARAGIPLEDM
EFWQFHPTGV HGAGVLLTEG CRGEGAILRN SNGERFMERY APAYKDLAPR DYVSRCMDQE
IKEGRGCGPN KDYINLDMTH LGAETIMKRL PSVFEIGHNF ANVDITKEPI PVVPTIHYQM
GGIPTNIHGQ VVTQNADNKS EVVNGLYAVG ECSCVSVHGA NRLGTNSLLD LLVFGRAAGN
HIVEFNNANK MHKPLPADAA DLTLARIARL DNASGGEYAQ DVANDIRTAM QTHAGVFRTQ
ALMDEGVTKI AALRERVKNI GLKDKSKIFN TARIEALEVE NLIEAAEATI VSAAARHESR
GAHSVDDYGD TPEHPNGRND TDWHKHTLWH SEGSRLSYKP VQMKPLTVES VPLKVRSF
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