| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3600 |
|---|
| Symbol | |
|---|
| ID | 4013746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 3802462 |
|---|
| End bp | 3802908 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637943259 |
|---|
| Product | succinate dehydrogenase subunit C |
|---|
| Protein accession | YP_550403 |
|---|
| Protein GI | 91789451 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
|---|
| TIGRFAM ID | [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.287594 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAT CAGCGACAAC CGTAGCGAAG AAGCGGCCCG AGTTCCGCAA CATCAACGCC
TTTACCGACC TCCCCAGCTA CCGCCTGCCC CTCGCCGGCC TTGTCTCCAT CCTCCACCGC
ATCAGCGGGG CCATCATGTT TTTGCTGATG CCCTTCATCA TCTGGATGTT CGACACCTCG
ATATCGTCGG AAATCTCCTT CTCCAGATTC AAGTCCGCAT TCAACGCGGG CATGCTCGGC
CTGCCGGGCT TCCTCTGGAA GCTCGTCGCG CTGGCACTGA TTTGGGCCTA CCTGCACCAT
TTCATCGCAG GGCTTCGCCA CTTGTGGATG GACACCAGCC ATGCGGCCGT CAGCAAGGAA
TTCGGCAAGT CATCAGCCGC CGTCACGCTG GCCGTGAGCA TTGGCCTCAC GCTCGTGCTC
GGCGCCAAGC TGTTTGGCCT TTACTAA
|
|---|
| Protein sequence | MSESATTVAK KRPEFRNINA FTDLPSYRLP LAGLVSILHR ISGAIMFLLM PFIIWMFDTS
ISSEISFSRF KSAFNAGMLG LPGFLWKLVA LALIWAYLHH FIAGLRHLWM DTSHAAVSKE
FGKSSAAVTL AVSIGLTLVL GAKLFGLY
|
|---|
| |