Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3581 |
Symbol | |
ID | 4013766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 3782070 |
End bp | 3782966 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637943242 |
Product | integrase catalytic subunit |
Protein accession | YP_550386 |
Protein GI | 91789434 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.303631 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTACC AGCTCGTTGA GGACTTGCAA AAGAAGGCTA CCCCCCAAGT GCCCGTTAGC CAGACGTGCC GAATCCTCGA AATTAGCCGC TCCGGATACT ACGCGGCGCG TAAGCGCAGC CAGCAGGCAC CCGTGGTGTG CGCAGCCAGC GTTCATTTGC AAGCCGCTTT CGCGGCCAGT GGCCGCGCTT ACGGTAGCCG CAGATTGCGT GCTGCGCTGC ACGCACGAGG CGTGACCGTG GGACGTCACC GGGTACGTAG CCTCATGCGT GCCCATGGGC TGCGCTCGGT CTGGAGGCGC AAGTTTGTGC ACACCACGAA CAGCAAGCAC GGTCTGGCCG TCTCGCCGAA CGTGCTGGAC CGGCAGTTCG AGCAAACGGC ACCTGATCGG GCTTGGGTTT GCGACATTAC CTATATTCGC ACGCGTAGTG GCTGGCTGTA TCTGGCTGCA GTGCTGGACT TGCATTCGCG CAGGATCGTG GGCTGGGCTA CTGCTGGAGA TATGCAGGCT ACGCTGGTGA CGACGGCCTT GCAGATAGCC ATTGCGCAGC GCAATCCCAG TCCTGGGCTA ATCGTGCACT CAGACAGGGG CACGCAGTAC GCGAGTAGCG CGCATCAGGC GCTGCTGAAA AAGCATGGGC TGGTAGGTAG CATGAGCCGA AAAGGCAACT GCTGGGATAA CGCTGTGATG GAGCGTTTCT TCCTGAATTT GAAAATGGAA CGGGTCTGGC AAAAAGACTA CGCAAATCAC AGTGAGGCCA CAAACGACGT TGCTGACTAC ATCGTCGGCT TCTACAACTG TGAACGACTG CATTCAAAAC TGGGAAATTT GTCACCCATT GCCTTCGAGC AAAAATCGGC AACTCAACAA CCTATCGATG TGTCCGAAAT AACTTGA
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Protein sequence | MSYQLVEDLQ KKATPQVPVS QTCRILEISR SGYYAARKRS QQAPVVCAAS VHLQAAFAAS GRAYGSRRLR AALHARGVTV GRHRVRSLMR AHGLRSVWRR KFVHTTNSKH GLAVSPNVLD RQFEQTAPDR AWVCDITYIR TRSGWLYLAA VLDLHSRRIV GWATAGDMQA TLVTTALQIA IAQRNPSPGL IVHSDRGTQY ASSAHQALLK KHGLVGSMSR KGNCWDNAVM ERFFLNLKME RVWQKDYANH SEATNDVADY IVGFYNCERL HSKLGNLSPI AFEQKSATQQ PIDVSEIT
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