Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3340 |
Symbol | |
ID | 4013993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 3536711 |
End bp | 3537697 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637943004 |
Product | transposase IS116/IS110/IS902 |
Protein accession | YP_550148 |
Protein GI | 91789196 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.451558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCTA CTTCAGAACA AATATTCATT GGTATCGATG TCTCCAAAGC AACGCTTGAT CTGGCCGTTC GCGGTCAAGC CAAAGCACAG CAGTTTGTCA ATACTGATGC AGGCGTTGGC GCCTTGATAG ACAGCCTGGC AACGCGTAAG GATAGTGTGG CGGTAGTCTT GATGGAGGCC ACGGGAGGCC TGGAGCGGCT GGCGGCAACG GCGCTGTGCC TGGCCGGTTA TGCCGTCATG GTGGTCAACC CCAGGCAGGC CCATGACTTT GCCAAGGCGC TTGGATTTTT GAGCAAGACC GACAAGAGCG ATGCCCAGGC GCTGGCCCAG TTCGCCCACA CCCTTTACAG CAGTGACAAG CGGGACAAGT TGCTGCTCAA GTTGCCAACA GTGCAGCAGG ACATGCTCGC GGCAATGGTC ACCCGGCGCT CCCAGCTCGT GGTGATGCGC GTGGCGGAGG GTAACCGGCT GGCAAGCAGC CATCCGACGC AGAAAAAAAG CATTCAGGCT GTACTCAAGG TCATTGACCG TCAGGTCAAG GAGCTTGATG CAGACATTGC AGGCAGTCTG GGCAAGCATT TCAAGGAAAA GCTCGATTTG CTCAAAGGTA TGAAAGGTGT GGGGATCTCG ACCCAGGCTG CCTTGATGGC ATCGTTGCCA GAGTTGGGCA GTTTGAGTGC GCGCGAGATT GGCAAGCTGG TAGGGGTGGC ACCGCTTAAC TGCGATAGTG GCACGATGAA GGGCAAAAGA GTCACTTGGG GTGGGCGTGC TGACATGCGC TCGGCCCTGT ACATGGCCAG CCTGAGTGCG GTGCGTCATG ACCCGTTGAT CAAGGCTTTT TATCAGCGCT TGCGTGCGGC AGGCAAGCCT GCGAAGGTGG CGTTGGTGGC CTGCATGCAC AAGCTGTTGA CGATCATGAA TGCCATCATC AAGTCGGGCA AGCCCTGGCA GGCGGGCTAT GGTTGTCCAC AGGCTGGAGA CGCTTGA
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Protein sequence | MSATSEQIFI GIDVSKATLD LAVRGQAKAQ QFVNTDAGVG ALIDSLATRK DSVAVVLMEA TGGLERLAAT ALCLAGYAVM VVNPRQAHDF AKALGFLSKT DKSDAQALAQ FAHTLYSSDK RDKLLLKLPT VQQDMLAAMV TRRSQLVVMR VAEGNRLASS HPTQKKSIQA VLKVIDRQVK ELDADIAGSL GKHFKEKLDL LKGMKGVGIS TQAALMASLP ELGSLSAREI GKLVGVAPLN CDSGTMKGKR VTWGGRADMR SALYMASLSA VRHDPLIKAF YQRLRAAGKP AKVALVACMH KLLTIMNAII KSGKPWQAGY GCPQAGDA
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