Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3338 |
Symbol | |
ID | 4013991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 3534402 |
End bp | 3535262 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637943002 |
Product | 20S proteasome, A and B subunits |
Protein accession | YP_550146 |
Protein GI | 91789194 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3484] Predicted proteasome-type protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.425483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAAATA GCAAACCCCA TTACCGAACT GCCATGACTT ATTGCACTGC CATCAAACTG AATGCCGGTC TGGTCTTTTT GTCGGATTCC CGCACCAATG CCGGACTCGA CCACATCAGC ACCTTCCGCA AGATGATCGT CTACGAAAAG GCCGGCGACC GTTTCATGGT GCTGCTGACC GCCGGCAACC TCTCCATCTC GCAGTCGGTG CGCGAGATTC TCCAGATCGA GCACCTGAAG GACCCGGAAA CCGGCGAATC CATCACCATC TGGAACGCCA AGAGCATGTT CGATGCCGCC CGCGTGCTGG GCTCGGCGAT ACGCCGCGTC TATGACCGCG ATGCCGACGC GCTGCGAAAG GCGGATGTCG ATTTCAATGT CTCGCTGATC TTCGGCGGCC AGATTCGCGG TGAAGGCATG CGCCTGTTCC AGATGTACTC GGCCGGCAAC TTCATTGAAG CGACGGGTGA AACGCCCTAC TTCCAGGTGG GCGAATCGAA ATACGGCAAG CCCGTGCTCG ACCGCGTCAT CACCCCCGAG ACGCCGCTGG CCGAAGCCGC CAAATGCGCG CTGGTGTCGA TGGACTCGAC CATGAAATCC AATCTCTCGG TGGGCATGCC ACTGGACCTG GTGGTGTACG AGGTGGACAC CTTCCAGAGC GACAAGGTGG TGTGCATCGA CAGCAGCAAC CCCTATTACT CGATGCTGCA CAACAATTGG GGCAGACGGT TGCGCGAGGT GTTCGACAGC ATTGAAGACC CAGTATGGGA CGACGCGCAC ACCGACATCC CGCTGAAAAT GCCGGCAAAC CGCCACGAAC CGCTCAAGAA AATCAGCAGT CCCAGCGAAA AGCTGATTTA A
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Protein sequence | MRNSKPHYRT AMTYCTAIKL NAGLVFLSDS RTNAGLDHIS TFRKMIVYEK AGDRFMVLLT AGNLSISQSV REILQIEHLK DPETGESITI WNAKSMFDAA RVLGSAIRRV YDRDADALRK ADVDFNVSLI FGGQIRGEGM RLFQMYSAGN FIEATGETPY FQVGESKYGK PVLDRVITPE TPLAEAAKCA LVSMDSTMKS NLSVGMPLDL VVYEVDTFQS DKVVCIDSSN PYYSMLHNNW GRRLREVFDS IEDPVWDDAH TDIPLKMPAN RHEPLKKISS PSEKLI
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