Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3301 |
Symbol | |
ID | 4014032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 3496790 |
End bp | 3499138 |
Gene Length | 2349 bp |
Protein Length | 782 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637942967 |
Product | hypothetical protein |
Protein accession | YP_550111 |
Protein GI | 91789159 |
COG category | [R] General function prediction only |
COG ID | [COG4258] Predicted exporter |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.149323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.322997 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGGCCA GGCTTCTCCG GCGCCAGTTC TTGCCGGTCT GGATCTGGCT GGCGTTTTTG CTGGCCTGCG GCGCCATCAT CAGCCGCACG CCCATCACCA CCGACCTGTC GGCATTCTTG CCGCGCAATC CTACGACCGA GCAGCAACTG CTGATGGATC AACTGCGTGA AGGCCTGGCC TCACGGCTGA TTCTGGTGGG CATCGAAGGC GCCGATGCGC CCACGCGTGC CCGACTGTCC AAAGCAGTGG CCCAGCGCCT GCGCGCCGAT TCTGCCTTTG TCTCCATCAA CAATGGCGAG CCGGTCAACA CCGAGCGCGA CCGCGCTTAC CTGTTCAACA ACCGCTACCT GCTCAGCCCG GCGGTGACGC CCGAACGCTT CAGTGCCGAG GGCCTGCATG CGGCGCTGGG CGAAAGCATC GATCTGCTGG CCTCGCCCGC CGGCTTGCTG ATGAAGTCCA TGCTGCCCCG CGACCCGACC GGCGAAATGG TGCAGCTGCT CGGCGAACTC GACAACGGCA AACACCCGCC CCTGGTCGAC GGCACCTGGG CCTCGAGCGA CGGTGCGCGC GCCCTGATGC TGCTACAAAC GCGAGCGGCG GGCTCGGACA CCGATGCCCA GCAAAGCGCC ATGGCCGCCA TCCGGCAGGC GTTTGATGCA GCGCCCCAGG CAAGTCCTGA CGCCCGGCTG GTGATGAGCG GCCCCGGCGT GTTTTCTGTG ACATCGCGCG AGACCATCCG AAGCCAGGTC AGCCGGCTGT CCCTGATCAG CGTTGTGCTC ATTGCCACGC TGCTGTTGCT GGTCTATCGC TCGCTGACGG CGCTGGCCCT GGGTTTTCTG CCTGTCCTCA GCGGTGTGCT GGCCGGTGTT GCAGCGGTGA GCCTGGGTTT TGGAACGGTG CACGGCATCA CCCTGGGCTT CGGCACCGCC TTGATTGGCG AGGCGGTGGA CTATTCGATC TACCTCTTTG TGCAGTCCGA ACAGGCCGGC GCTGACCCGC AAAACTGGGT CAAGCGCTTC TGGCCCACGG TGCGGCTCGG CGTGCTGACC TCGATATTCG GCTTTGCCTC GCTACTGCTG TCGGGCTTTC CCGGTCTGGC GCAACTCGGC CTGTACGCGA TTGCCGGCCT GGTCGCCGCC GCGACCATGA CCCGCTTTGT GCTGCCCCAC CTGCTGCCAG CGAAGTTCCG CATCCATGAT GTATCGGCGG TCGGCCGCCT GCTGAGCCGC CTGACGCTGC GCGCCGCGGC GCTGCGCTGG CCAGCGGCGG TCCTCCTGCT GGCGGCCTGC GCCGTACTGG TCGGCCAGCG CGCCACCTTG CTGAATGAGA AAATTTCCTC GCTGAGCCCG GTGTCGCAGG CCGAGGTGGC GCTGGACGAG CGCTTGCGCG CCGACATGGG CGCGCCCGAT GTGCGTTACC TGGTGGTGGT ATCCGGCACC AGCCGGGAAT CCGTGCTGCA TGACTCCGAA CTGGTTTCCG CGCTGCTGCA GACGCAGGTC GATCAGGGCG ATCTGGCCGG TTTTGAAAGC CCCAGCCGCT ATCTTCCGAG CACAGCCACC CAGCGCGCCC GCCAGGCCAG CCTGCCTCCG CCTGGCGAGT TGCAGGCGCG CCTGACGCAA GCCGTTCAGG AGCTGCCGGT CCGAGCGCAA CTGTTCACGC CATTTCTTGC CGACGTTGAA GCCACCCGCA GCAGACCCCT GCTGCTGCCG GGCGACCTGG AGCGAACCTC GATGGCGATG GCGGTAGATG CGCTGCTGCT GCGGCAGGAT CGAGGCTGGA CGGCCTTGCT GCCGCTCAAC GCCCCTGAGG GCGCCGGCAT CCACGCCGGA AAGATTCGCG CAGCCCTGGC TACCACGGGC CTGCCGAATG CGCTGTTTGT CGACCTGAAG GCCGAGTCCG ACCGGCTGTA TTCGGGCTAC CTGCATGAAG CCGCGCTGCT CTCGCTGGGT GGGTTGGTGG CCATCGTCGC TCTGCTGCTG CTGGTGTTCC GCTCGCCGAT GCGCGTGCTG CGCACCATCG CGCCGCTGGC CGCCGCCGTG GTGACAGTCA CCGCCGGGCT GGCCCTGTTT GGCCAGCAAT TGACCATTTT GCATCTGGTG GGCTTGCTGC TGGTGGTGGC TGTGGGCTCC AACTACGCGC TGTTTTTTGA CCGGCCCGAA CCGCAGGAAC CCATTTCCCA TCGCACCCTG GCCTCTATGC TGCTGGCCAA CCTCACCACC GTTGCAGGTT TTGGGCTGCT GGCTTTTTCC AAGGTATCCA TACTGCACGC CATGGGTGTG ACCGTGGCAC CGGGCGTCAT CCTGGCGCTC GTCTATGCCG CCATTTTTGC GAGGCCATCC CGTGCCTGA
|
Protein sequence | MMARLLRRQF LPVWIWLAFL LACGAIISRT PITTDLSAFL PRNPTTEQQL LMDQLREGLA SRLILVGIEG ADAPTRARLS KAVAQRLRAD SAFVSINNGE PVNTERDRAY LFNNRYLLSP AVTPERFSAE GLHAALGESI DLLASPAGLL MKSMLPRDPT GEMVQLLGEL DNGKHPPLVD GTWASSDGAR ALMLLQTRAA GSDTDAQQSA MAAIRQAFDA APQASPDARL VMSGPGVFSV TSRETIRSQV SRLSLISVVL IATLLLLVYR SLTALALGFL PVLSGVLAGV AAVSLGFGTV HGITLGFGTA LIGEAVDYSI YLFVQSEQAG ADPQNWVKRF WPTVRLGVLT SIFGFASLLL SGFPGLAQLG LYAIAGLVAA ATMTRFVLPH LLPAKFRIHD VSAVGRLLSR LTLRAAALRW PAAVLLLAAC AVLVGQRATL LNEKISSLSP VSQAEVALDE RLRADMGAPD VRYLVVVSGT SRESVLHDSE LVSALLQTQV DQGDLAGFES PSRYLPSTAT QRARQASLPP PGELQARLTQ AVQELPVRAQ LFTPFLADVE ATRSRPLLLP GDLERTSMAM AVDALLLRQD RGWTALLPLN APEGAGIHAG KIRAALATTG LPNALFVDLK AESDRLYSGY LHEAALLSLG GLVAIVALLL LVFRSPMRVL RTIAPLAAAV VTVTAGLALF GQQLTILHLV GLLLVVAVGS NYALFFDRPE PQEPISHRTL ASMLLANLTT VAGFGLLAFS KVSILHAMGV TVAPGVILAL VYAAIFARPS RA
|
| |