Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3253 |
Symbol | |
ID | 4014061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3444225 |
End bp | 3445478 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637942920 |
Product | NADH dehydrogenase subunit D |
Protein accession | YP_550065 |
Protein GI | 91789113 |
COG category | [C] Energy production and conversion |
COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.626895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAA TCAAAAACTA CACGCTCAAT TTTGGACCGC AGCATCCGGC GGCACATGGC GTTTTGCGCC TGGTGCTGGA GCTTGACGGC GAGGTGATCC AGCGCGCCGA CCCGCACATC GGTCTGCTGC ACCGCGCGAC TGAAAAACTG GCCGAAAGCA AAACCTACAT CCAGTCACTG CCCTACATGG ACAGGCTCGA CTATGTGTCG ATGATGTCCA ATGAGCAGGC CTATTGCCTG GCCATCGAGA AATTGCTGGG CGTGGATGTG CCCATACGTG CGCAATACAT CCGGGTGATG TACGCGGAAA TCACGCGCCT GCTCAACCAC CTGCTGTGGT TGGGCGCGCA CGGTTTCGAC TGCGGCGCGA TGAACATCCT GATTTACTGC TTTCGCGAAC GCGAGGCGCT GTTTGACATG TACGAGGCCG TTTCGGGTGC GCGCATGCAT GCGGCCTACT TCCGGCCGGG GGGCGTTTAC CGCGACCTGC CCGATACCAT GCCGCAGTAC CGCGTCAGCA AGATCAAGAA CGCCAAGGCC ATTGCCGCGC TGAACGAAAA CCGCCAGGGG TCCCTGCTCG ATTTCATCGA TGACTTCGTG GCCAAGTTCC CGCGGCTGGT GGACGAGTAC GAAACGCTGC TGACCGACAA CCGCATCTGG AAGCAGCGCA CGGTGGGCGT CGGGGTCGTG TCGCCCGAGC GCGCGCTCAA CCTCGGTTTC ACCGGCCCTA TGCTCCGGGG CTCCGGCTTC GCCTGGGACC TGCGCAAGCA GCAGCCCTAC GATGTCTACG ACCGTATGGA TTTCGACATT CCCGTTGGAA AGACCGGCGA TTGCTACGAC CGCTACCTGG TTCGCATCGA AGAGATGCGC CAGTCCAACC GCATCATCAA GCAGTGCATC GACTGGCTGC GCGTCAACCC TGGCCCGGTG ATCACCAGCA ACCACAAGGT CGCGGCGCCT GACCGTGAAT CCATGAAGAC CAACATGGAA GAGCTGATTC ACCACTTCAA GCTTTTCACT GAAGGTTTTC ACGTGCCCGA AGGCGAGGCC TATGCCGCGG TCGAGCATCC CAAGGGCGAG TTCGGCATCT ACATCGTCAG CGATGGTGCC AACAAGCCAT ACCGCCTGAA AATCCGCCCG CCCGGCTTTC CGCACCTGGC GGCCATGGAC GAAATGTCGC GCGGCCACAT GATTGCCGAC GCCGTCGCCG TGATCGGCAC CATGGACATT GTGTTCGGTG AAATTGATCG CTAA
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Protein sequence | MAEIKNYTLN FGPQHPAAHG VLRLVLELDG EVIQRADPHI GLLHRATEKL AESKTYIQSL PYMDRLDYVS MMSNEQAYCL AIEKLLGVDV PIRAQYIRVM YAEITRLLNH LLWLGAHGFD CGAMNILIYC FREREALFDM YEAVSGARMH AAYFRPGGVY RDLPDTMPQY RVSKIKNAKA IAALNENRQG SLLDFIDDFV AKFPRLVDEY ETLLTDNRIW KQRTVGVGVV SPERALNLGF TGPMLRGSGF AWDLRKQQPY DVYDRMDFDI PVGKTGDCYD RYLVRIEEMR QSNRIIKQCI DWLRVNPGPV ITSNHKVAAP DRESMKTNME ELIHHFKLFT EGFHVPEGEA YAAVEHPKGE FGIYIVSDGA NKPYRLKIRP PGFPHLAAMD EMSRGHMIAD AVAVIGTMDI VFGEIDR
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