| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3238 |
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| Symbol | |
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| ID | 4014084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 3427102 |
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| End bp | 3428886 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637942905 |
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| Product | ABC transporter related |
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| Protein accession | YP_550050 |
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| Protein GI | 91789098 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00207534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.825064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCTT CTGCGTCTTC TGCGCCCCCC AAGGGCTCGC CCCGCTCCCT GTCGGGCCTC
GTGCCCTTTC TGCGCCCTTA CCGCGGCCGG ATTGCGCTGG CGCTATTTTT TCTCGTCATG
GCGGCCGTGG CCACGCTGGT CTTTCCGCTG GCGCTGCGCA GCCTCATCGA CGGCGGCCTG
AGCGTGGCGG ACAAGGGCGC CCAACTGATG GCGCTGCGCA CCCACTTTTT CGAGCTGTTT
GCCGTTGCCG CCGCACTGGG GCTTTTTTCA GCGGGCCGCT TTTACATGGT CAGCTGGCTC
GGCGAACGGG TCACGGCCGA CCTGCGCAAT GCGGTGTATT CGCATGTGGT GCGGCAAAGC
CCGGAGTTCT TTGAAACCAC GCAAACCGGC GAGGTGCTGT CGCGCCTGAC CGGCGACACG
ACGCTGGTGC AAACCGTGGT GGGTTCGTCG CTGAGCATGG GTTTGCGCAA CGCCGTGATG
GGCGTCGGCG CGCTGGGCAT GCTGGTCTAT ACCAACCCCT ACCTGATGGT TCAGGTGCTG
GGGATTCTGG TGCTGATTGT GGCGCCCTCG GTGTGGTTTG GGCGGCGCGT GCGCAAGCTC
TCGCGCGCCA GCCAGGACCG GGTGGCCGAC TCCAGCGCGA TCGCGGCCGA GGTGCTCAAT
GCCATTCCCG TGGTGCAGAG CTACACCGCT GAAGCGCGCG AGGCCGCGCG CTTCGATGCC
TCGACCACCA CCGCATTCAA CACCGCCATC CGGCGCACCA GGGCGCGTTC GGTGTTGGTG
GCCTTCATCA TCATTGCCAC GTCGGCGGCC CTGCTCTGGG GCCTGTACCA GGGCACGCAG
GCGGTGATGC GCGGCGACAT CAGCGCCGGC CACCTGGGCC AGACGGTGGT CTATGTGATC
ATTCTGGCCA GCGCCACGGC GGTGCTCGGC GAGGTCTATG GCGACCTGTT GCGCGCGGCC
GGTGCGACTG AGCGACTGAT GGAGCTGCTG GAAACACGCT CGCCCGTGGT TTCTCCATCA
AAACCTGCTT CAGCCCCCGA AATACGGTCA GGAAGCGCTG TTAAATTTGA AGCAGTGACG
TTTCATTACC CGTCACGCCC GGCGCAGGCG GCCTTGAGCA ACTTCGACTT GAGCGTGGCC
CCGGGTGAAA CCGTGGCCCT TGTGGGGCCC AGCGGCGCCG GCAAAAGCAC GGTGTTCCAG
TTGCTGCTGC GCTTTTACGA TCCAGCCTCG GGCCGCATTG AACTGGACGG CATGCGAACG
GCGGACATGG CGCTGGAAGA TTTGCGCCAT CGCGTCGGCA TCGTGCCGCA GGATGCCGTG
ATTTTCTCCA CCAGCGCGCT GGAAAACATC CGCTACGGCA AGCCCGATGC CACCGACGAA
GAAACCAGAG CCGCAGCCAA AGCGGCGTTT GCGCACGAGT TCATCACGGC CCTGCCCGAA
GGCTACGACA CCTTTCTGGG TGAGCGCGGC GTGCGCCTGT CGGGCGGGCA GCGCCAGCGC
ATTGCGATTG CGCGGGCCAT GCTGAAGAAC TCTCCGCTGC TGCTGCTGGA TGAGGCCACC
AGCGCGCTCG ATGCGGAGAG CGAACGCATG GTGCAGGCCG CGCTGGAGTC GGCCATGAAG
GGCCGCACGA CGCTGGTTAT TGCGCACCGG CTGGCCACGG TGCAGAAGGC CGATCGCATC
GTCGTGCTCG ACCACGGCCG TCTGGTCGAG CAGGGAACGC ACGCCGAACT GGTGAGCCGT
GGCGGGGTCT ACGCACGGCT GGCGGCGCTG CAGTTCAACG CCTGA
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| Protein sequence | MTSSASSAPP KGSPRSLSGL VPFLRPYRGR IALALFFLVM AAVATLVFPL ALRSLIDGGL
SVADKGAQLM ALRTHFFELF AVAAALGLFS AGRFYMVSWL GERVTADLRN AVYSHVVRQS
PEFFETTQTG EVLSRLTGDT TLVQTVVGSS LSMGLRNAVM GVGALGMLVY TNPYLMVQVL
GILVLIVAPS VWFGRRVRKL SRASQDRVAD SSAIAAEVLN AIPVVQSYTA EAREAARFDA
STTTAFNTAI RRTRARSVLV AFIIIATSAA LLWGLYQGTQ AVMRGDISAG HLGQTVVYVI
ILASATAVLG EVYGDLLRAA GATERLMELL ETRSPVVSPS KPASAPEIRS GSAVKFEAVT
FHYPSRPAQA ALSNFDLSVA PGETVALVGP SGAGKSTVFQ LLLRFYDPAS GRIELDGMRT
ADMALEDLRH RVGIVPQDAV IFSTSALENI RYGKPDATDE ETRAAAKAAF AHEFITALPE
GYDTFLGERG VRLSGGQRQR IAIARAMLKN SPLLLLDEAT SALDAESERM VQAALESAMK
GRTTLVIAHR LATVQKADRI VVLDHGRLVE QGTHAELVSR GGVYARLAAL QFNA
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