Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3203 |
Symbol | |
ID | 4014127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 3388672 |
End bp | 3389685 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637942870 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_550015 |
Protein GI | 91789063 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000254635 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACATA CCGTTGCCCA CACCATCGCC CGTACCGCCA CCCTTCTCAC GCTGTCCAGC CTTGCACTGG CCGCAACCTG CGCATTCGCT GCGGGCGAGC CGGTGATCGG CCTGATCACC AAAACCGAAA CCAATCCCTT CTTCGTCAAG ATGAAGGAAG GGGCCGAGGC CGAGGCCAAA AAACTCGGTG CCAAGCTGCT GACCGCGGCC GGAAAATCCG ACGGCGACAC CGCAGGCCAG ATCACCGCCC TTGAAAACAT GGCGGCTGCC GGCGCCAAGA CCATTTTGAT CACCGCCAGC GGCGATGCCA TCGCCCCGAC CGTCAAAAAA CTGCAGGCCA AGGGCGTGCA GGTGATCGCG CTGGACAGCC CCTTTGCCGG CGCCGACGCG CTGTTTGCCA CCGACAACTA CCAGGCCGGC GTCCTGGTGG GCCAGTACGC CAAGGCGGCA ATGGCCGGCA AACCCGCCCG TATCGTCACG CTTGACCTGC TGCCCGGCCA CCCGGTGGGC GCACAGCGGC ACAACGGCTT CATGAAGGGT TTTGGCCTGC CTGCGGCAGA CGCCAAGTCC AACGAACTGT CGCGGGACCC TGCCGTGGTG TGCATGGCCG ACAGCTTTGG CGACCGGGCC AAGAGCCAGA CCGCCATGGA GAACTGCCTG CAGAAAAATC CCGACATCAA CGTGGTCTAC ACCATCAACG AACCCGCCGC CGCCGGCGCC TTCAACGCGC TGAAGAAGGC CGGCAAGGAA AAAGGCGTGC TGATCCTGTC CGTCGACGGC GGCTGCCAGG GCATCAAGGA TCTGGCGGCC GGCATGATCA CTGCGACCTC GCAGCAATAT CCGCTGAAGA TGGCGGCACT GGGCGTGGAG GCCGGCGTGA AGTACGCCAA GGGCGGCCAG AAGTCCTCGG GCTACACCGA CACCGGCGTA ACCCTGATCT CGGCCAAGCC GGTCAGCGGC GTGGACAGCA AGGACCTCAA GACGGGCATG GACCTTTGCT GGGGCACCAA ATGA
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Protein sequence | MKHTVAHTIA RTATLLTLSS LALAATCAFA AGEPVIGLIT KTETNPFFVK MKEGAEAEAK KLGAKLLTAA GKSDGDTAGQ ITALENMAAA GAKTILITAS GDAIAPTVKK LQAKGVQVIA LDSPFAGADA LFATDNYQAG VLVGQYAKAA MAGKPARIVT LDLLPGHPVG AQRHNGFMKG FGLPAADAKS NELSRDPAVV CMADSFGDRA KSQTAMENCL QKNPDINVVY TINEPAAAGA FNALKKAGKE KGVLILSVDG GCQGIKDLAA GMITATSQQY PLKMAALGVE AGVKYAKGGQ KSSGYTDTGV TLISAKPVSG VDSKDLKTGM DLCWGTK
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