Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2984 |
Symbol | |
ID | 4014331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 3139369 |
End bp | 3140556 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637942649 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_549796 |
Protein GI | 91788844 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.808904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.464937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCAC GCCGACTTGT TTTGACCCGC AGTGCTGCCG TTATCGGCGC CGCATCCACT GGCCTGCTGC TGCCCGAAAT CGTGCGCGCA CAGTCGGGCA AGGTGCGTGT GGGCTTCATG TTGCCCTACA CCGGCACCTT TGCCCAACTC GGGGTGGCCA TTGAAAACGG CTTTCGCCTG GCGATCAATG AGCAAGGCGG CAAGCTGGGC GGCCGCGAGA TCGAATACTT CAAGGTCGAC GATGAGTCCG AGCCGTCCAA AGGCATTGAA AACGCCAGCA AGCTGGTGCA ACGCGACAAG GTCGATGTAC TGGTCGGCAC GGTGCACTCC GGTGTGCAGA TGGGTATCCA GAAGGTCGCG CGCGACAGCG GCGTACTGAG CCTGATTCCC AACGCGGGCG TGCATGCCGC CACCCGCAGC CTGTGCGCAC CCAATGTGTT CCGTACCTCC TTCAGCAACT CGCAACCTAC CCGCGCCCTG GGTCAGGCCA TGATCGCAAA AGGCCATAAA AAAGCCGTCT GGATCACCTG GAAATATGCA GCCGGCGACG AGGCCTTTGA AGGCTTCAAG GAAAGCTACA CAGCGGCCGG CGGCACCATT ATCAAGGAAC TGGGCCTGCC CTTCCCCAAC GTTGAATTCC AGGCGCTGCT GACCGAAATC GCCGCACTCA AGCCCGATGC CGTGGCCTGC TTCTTCGCCG GCGGCGGCGC CGCGAAGTTC ATCCGCGACT ACGCAGCGGC GGGCCTCAAA GGCAAGATCC CGCTCTACGG TTCCGGCTTC CTGACCGAAG GCGTGCTGGA CGCGGCCGGC CCTGCGGCGG ACGGCATCAT CACCACCATG CACTACAGCG ACTCGCTGGA CACGCCGCGC AACAAGAAAT TCCGCCTCGA CTACGCCAAA GCCTTCAAGA CGCAACCCGA TGTGTACGCG GTGCAGGGCT ATGACACCGG CCTGCTGCTG ATCCAGGGCG CCAACGCCGT CAAGGGCGAC CTGGCCAACA AGCCCGCGCT CTACAAGGCC ATGGAAGGCG CCACCATCGA CAGCCCGCGC GGCAAGTGGA CCATGAGCAA GGCACACAAC CCGGTGCAGG ACATGTACCT GCGTGTGGTG GAAAACAAGG AAAACAAGGT GCTCGGCGTT GCGGCCAAGG CACTGGCCGA CTCCGGCGCC GGCTGCAAGA TGGGCTAG
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Protein sequence | MTSRRLVLTR SAAVIGAAST GLLLPEIVRA QSGKVRVGFM LPYTGTFAQL GVAIENGFRL AINEQGGKLG GREIEYFKVD DESEPSKGIE NASKLVQRDK VDVLVGTVHS GVQMGIQKVA RDSGVLSLIP NAGVHAATRS LCAPNVFRTS FSNSQPTRAL GQAMIAKGHK KAVWITWKYA AGDEAFEGFK ESYTAAGGTI IKELGLPFPN VEFQALLTEI AALKPDAVAC FFAGGGAAKF IRDYAAAGLK GKIPLYGSGF LTEGVLDAAG PAADGIITTM HYSDSLDTPR NKKFRLDYAK AFKTQPDVYA VQGYDTGLLL IQGANAVKGD LANKPALYKA MEGATIDSPR GKWTMSKAHN PVQDMYLRVV ENKENKVLGV AAKALADSGA GCKMG
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