| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2963 |
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| Symbol | |
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| ID | 4014382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3124687 |
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| End bp | 3125700 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637942626 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_549775 |
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| Protein GI | 91788823 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.247668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.87338 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAGCT CAATATCCCG GCCTGGCGGC TGGAAGGTCA TCAGGCTTGT GCCGGCGTGG
GCCGCCCTGG CTTTGCTGGC TTTGGGTTCG GCCTTCGCGG AGCCGCTGCG CGTTGCGGGA
AACTTCGCAG CGAATCACTC CAGCAGCCTG GCAATGGCCC AGTTCAAGCT GGACGTCGAA
AAGGTCTCCA GCGGGCAGAT CCAGGTCGAG GTCTTCCCGG CCATGCAGTT GGGCAGTGCC
CAGGACAATG TGGACCAGGT TCGCAGCGGG AAGCTGTTCA TGACCTGGAT CTCGACCGCC
TATCTCTCGC GCACCGTCCC GGAGCTGTCG GTACTCAGCA TTCCATTTTT GTTTACCGAC
CGTCAGCTCG CCTTCAAGGT CGTCGACGGC AAGGTTGGCG CCATGCTGGG AGGCAAGTTT
GCCGCCAAAG GTTTTTTACC CCTGGGCTTC ATGGAGTTGG GGCCACGTCA GCTGACCAAC
AGCCAGCGGC CGGTCCGCTC GATCACCGAT TTAAAAGGGC TGAAGCTGCG TCTGCAGCCG
GATGAAATTC ATATCGCGAC GTTTCAGGCG CTGGGCGCGA ACCCGGTGAA GATGGACATC
AAGGAGGTTT ATGGCGCGCT GCAGTCCGGT GCGCTGGATG CCCAGGAAAA TCCCTTTGCC
GTAATTCGGG ACAGGAACTT CCATGAGGTG CAGAAATACC TGACCAACAC CTCGCATTTT
TTCGATTTCA TCGTGCTGGT CGCCAACAAG CAAAGGTTCG AAGCGCTCAA GCCGGAGCAC
CAGAAAATCA TCCAGGACGC GGCCACCAAG GCGGTCATCG CGCAGCGGAC CTCTGCCGCC
GCGGAAGATA TCGGCGCGAT TGTCGATCTG GCAAACAGGG GCATGAAGTT TGAACCCGTG
CGCCCTTCGT TCCGGGCCGA CATGCGCAAG GCGACGGAAG GTATCGTCGA CAGCGTGCGC
CAAAAAGCCG GCGCGGACCT CGTTCAGGCT ACCCTGGACG CCGCCGTGCG ATAA
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| Protein sequence | MRSSISRPGG WKVIRLVPAW AALALLALGS AFAEPLRVAG NFAANHSSSL AMAQFKLDVE
KVSSGQIQVE VFPAMQLGSA QDNVDQVRSG KLFMTWISTA YLSRTVPELS VLSIPFLFTD
RQLAFKVVDG KVGAMLGGKF AAKGFLPLGF MELGPRQLTN SQRPVRSITD LKGLKLRLQP
DEIHIATFQA LGANPVKMDI KEVYGALQSG ALDAQENPFA VIRDRNFHEV QKYLTNTSHF
FDFIVLVANK QRFEALKPEH QKIIQDAATK AVIAQRTSAA AEDIGAIVDL ANRGMKFEPV
RPSFRADMRK ATEGIVDSVR QKAGADLVQA TLDAAVR
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