Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2940 |
Symbol | |
ID | 4014398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3101796 |
End bp | 3104132 |
Gene Length | 2337 bp |
Protein Length | 778 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637942603 |
Product | ATPase AAA-2 |
Protein accession | YP_549752 |
Protein GI | 91788800 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.206426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.985404 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCCC AGGAACTAGA AGTCAGCTTG CACATGGCCT TTGTCGAAGC GCGGCAGCAA CGTCACGAGT TCATCACGGT GGAACACCTG CTGCTCGCCT TGCTGGACAA CCCCAGTGCG GCTGAAGTGC TGCGCGCCTG TTCAGCCAAT GTGGATGATC TGCGCAAGTC GCTTGCCAAT TTCATCAAGG ACAACACGCC GCAGGTGGCA GGCACCGACG ACGTCGACAC GCAACCCACG CTGGGTTTCC AGCGTGTGAT CCAGCGCGCC ATCATGCATG TGCAGTCCAC CGGCAACGGT AAAAAAGAAG TCACCGGTGC CAATGTGCTG GTCGCCATTT TTGGCGAGAA GGATTCCCAC GCGGTGTATT ACCTGCACCA GCAGGGCGTG ACGCGCCTGG ACGTGGTGAA TTTCATCGCC CATGGCATCA AGAAAAGCGA TCCGCCCGAG CCCGCCAAGA GCGGCGAAAG CGCCGCCGAG AACGAGGAAG GCAGCGAAAA GAACGAAAAG GCTTCTCCGC TGGAGCAGTT CACGCAGAAC CTCAACCAGC TCGCCAAGGA TGGCAAGATC GATCCCCTGA TCGGCCGCCA GTACGAAGTC GAGCGGGTGA TCCAGATTCT CTGCCGTCGC CGCAAGAACA ACCCGCTGCT GGTGGGTGAG GCTGGCGTGG GTAAAACCGC CATTGCCGAG GGCCTGGCCT GGCGCATCAC GCAAAAAGAT GTGCCGGAAA TCCTGGCCGA GGCGAACGTG TATTCGCTCG ACATGGGTGC CTTGCTGGCC GGTACCAAAT ACCGCGGCGA CTTTGAGCAG CGCCTCAAGG GCGTGCTGAA GGCGCTGAAA GACAAGCCCA ACGGCATCCT GTTCATTGAC GAAATCCACA CCCTGATCGG TGCCGGTGCG GCCTCGGGCG GTACGCTGGA CGCGTCCAAC CTGCTCAAGC CTGCGCTGAG TTCCGGCCAG CTCAAGTGCA TTGGCGCGAC CACCTTCACG GAATACCGCG GTATTTTCGA GAAGGATGCG GCCCTGTCGC GGCGCTTCCA GAAGGTCGAT GTGGTCGAGC CGACGGTGCA GGAAACAGTC GAGATTCTGA AGGGTCTCAA GTCGCGCTTT GAAGAGCACC ACAGCGTCAA GTACGCCGTG GCGGCCCTGC AGGCCGCGGC CGAGCTGAGC GCCAAGTACA TCAATGACCG CCATCTGCCC GACAAGGCGA TCGACGTCAT TGATGAGGCG GGCGCCGCCC AGCGCATCCT GCCCGCCAAC AAGCGCAAGA AAACCATCAC CAAGACCGAG GTCGAGGAAA TCGTGGCGAA GATTGCCCGC ATTCCGCCCG CCAACGTCTC CAATGATGAC CGCGGCAAGC TCAAGACCCT GGAACGCGAC CTCAAAAGCG TGGTGTTCGG CCAGGACAAG GCGCTGGACG TGCTTGCGTC GTCTGTCAAG ATGGCGCGTT CCGGCCTGGG CAAGGACGAC AAGCCGATTG GCTGCTTCCT GTTCTCCGGC CCCACGGGTG TCGGCAAGAC CGAGGCCGCC AAGCAGCTGG CCTACATCAT GGGCATCGAG CTGATCCGCT TCGACATGTC GGAGTACATG GAGCGCCATG CCGTGAGCCG CCTGATCGGC GCGCCTCCGG GCTACGTCGG TTTTGACCAG GGCGGTTTGC TGACCGAGGC GATCACCAAG AAGCCGCACG CGGTGCTGCT GCTCGACGAG ATCGAGAAGG CGCACCCCGA CATCTTCAAC GTGCTGCTGC AGGTGATGGA CCATGGCACG CTCACGGACA ACAACGGGCG CAAGGCCGAT TTCCGTAACG TGATCATTGT CATGACCACC AATGCCGGTG CCGAGACCAT GAACAAGGCG ACCATCGGCT TTACCAACCC GCGTGAGGCG GGCGACGAGA TGGCGGACAT CAAACGCCTG TTCACGCCAG AGTTCCGCAA CCGCCTCGAT GCGGTGGTGA GCTTCAAGGC GCTGGACGAA GTCGTCATCC TGCGCGTGGT CGACAAGTTC CTGCTGCAGC TGGAGACGCA GCTGGCCGAG AAGAAAGTCG AAGTCACCTT CACCGACGGG CTGCGCAAGT ACCTGGCCAA GAAGGGCTTC GATCCGCTCA TGGGCGCTCG CCCGATGCAG CGCCTGATCC AGGACACGAT TCGTCGCGCG CTGGCTGACG AGCTGCTGTT TGGGCGCCTG ATCGATGGCG GCCGCCTCAC GGTCGACATG AAGGTCACGA CGGACGAGAA GGGCGTCGAG ACCGGCGAGG TCCAGCTCGA CATCCAGCCG CTGCCGAAGA AAGAGGGCAA AGCCAGGCCC GAGGCGGAGG CCGCAGAGAC CAACTGA
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Protein sequence | MIAQELEVSL HMAFVEARQQ RHEFITVEHL LLALLDNPSA AEVLRACSAN VDDLRKSLAN FIKDNTPQVA GTDDVDTQPT LGFQRVIQRA IMHVQSTGNG KKEVTGANVL VAIFGEKDSH AVYYLHQQGV TRLDVVNFIA HGIKKSDPPE PAKSGESAAE NEEGSEKNEK ASPLEQFTQN LNQLAKDGKI DPLIGRQYEV ERVIQILCRR RKNNPLLVGE AGVGKTAIAE GLAWRITQKD VPEILAEANV YSLDMGALLA GTKYRGDFEQ RLKGVLKALK DKPNGILFID EIHTLIGAGA ASGGTLDASN LLKPALSSGQ LKCIGATTFT EYRGIFEKDA ALSRRFQKVD VVEPTVQETV EILKGLKSRF EEHHSVKYAV AALQAAAELS AKYINDRHLP DKAIDVIDEA GAAQRILPAN KRKKTITKTE VEEIVAKIAR IPPANVSNDD RGKLKTLERD LKSVVFGQDK ALDVLASSVK MARSGLGKDD KPIGCFLFSG PTGVGKTEAA KQLAYIMGIE LIRFDMSEYM ERHAVSRLIG APPGYVGFDQ GGLLTEAITK KPHAVLLLDE IEKAHPDIFN VLLQVMDHGT LTDNNGRKAD FRNVIIVMTT NAGAETMNKA TIGFTNPREA GDEMADIKRL FTPEFRNRLD AVVSFKALDE VVILRVVDKF LLQLETQLAE KKVEVTFTDG LRKYLAKKGF DPLMGARPMQ RLIQDTIRRA LADELLFGRL IDGGRLTVDM KVTTDEKGVE TGEVQLDIQP LPKKEGKARP EAEAAETN
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