Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2893 |
Symbol | |
ID | 4014429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3052062 |
End bp | 3055634 |
Gene Length | 3573 bp |
Protein Length | 1190 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637942557 |
Product | DNA polymerase III, alpha subunit |
Protein accession | YP_549706 |
Protein GI | 91788754 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.580471 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGTAA TCAGCAAAAT GCGCGTGGGC CCCAGCCCTA AAATGAAGCG CATGTTTGTC CATTTACGTA TCCATACCGA GTTTTCAGTC GTCGACGGCA CCAACCGCAT TGATGAAATC GTCCAGGCTG CCGCCGCAGA CCAGCAGCCG GCGCTGGCCA TTACCGACCT GAGCAACCTG TTTGGCACGG TCAAGTTTTA CAAGGAAGGC CGCGGCGCCG GGGTGAAGCC TTTGATAGGC GCCGACGTCT GGGTTCAGGT TCCAGGCAAA GATGCTGCGG CGCCTGCGGC CCGCCTGCTG CTGCTGGTGC AAAACCACAG GGGTTACCTC AACCTGTCCG AGTTGCTCAC GCGCGCCTGG ACCAGAAACG TGGTGCGCGA CCAGGCCGTG ATCAAGCTGG AATGGCTTGA AGAGCTGAAC GAGGGCCTGA TTGCGCTGTC GGGTGCCCAG GGGGGCGCCG TGGGCCAGGC CCTGCTTCAG GGGGACGACG CACGGGCGCT GGAATGCGCC CTGCACCTGG CGGGTCTGTT TCCCCACCGC TTTTACCTGG AGCTGCAGCG CGCCCAGCGC CCTGACGACG AGCGCCATGT GGCGGCGGCC GTCCAGCTGG CTGCCCGGCT CAAGCTGCCG GTGGTGGCCA CGCATCCCGT GCAGTTCCTC ACCTACGACG ACTACGAGGC GCACGAGGCG CGGGTCTGCA TTGCCGAAGG TGAAATACTG GGGAACACAC GCCGTGTGCG CAAGTTCACG CGCGAGCAAT ATTTCAAGTC GGCAGCGCAA ATGACGCAGC TCTTTGCCGA TGTGCCGTCG GCGCTGGCCA ATACGCTGGA AATTGCCAGG CGCTGCAACC TCAAGCTCGA GCTGGGCAAG CCCATGCTGC CTGATTACCC CACGCCGGAA GTCGAGGGCG TGCGCATGCC CATCGATGCC TACTTTCGCC ATGCCTCGTT TGAAGGGCTG GAAGAGCGCC TGGCGCACTT GTATCCCAAC GAAGCATTGC GGGACCAGAA ACGGCCGGTG TATGTGGAGC GGCTGGAGTT CGAGATCAAC ACCATTCTGA AGATGGGTTT CCCGGGCTAC TTCCTGATCG TGGGCGACTT CATCAACTGG GCCAAAAACA ATGGCTGCCC GGTGGGGCCG GGGCGCGGTT CGGGTGCGGG CTCGCTGGTG GCGTATGCGC TGAGGATTAC CGACCTGGAC CCGCTGCAAT ACAACCTGCT GTTCGAGCGC TTCCTGAACC CGGAGCGGGT CTCCATGCCC GACTTTGATA TTGATTTTTG CCAAAGCAAT CGTGACCGCG TGATTGACTA TGTGAAAGAC AAATACGGCC ATGATGCGGT CAGCCAGATC GTGACCTTTG GCACCATGGC GGCGCGCGCG GCGATTCGCG ATGTGGGCCG TGTGCTTGAT TTTCCCTATG GTTTTTGCGA TGGAATTTCC AAGCTGATTC CGAACAAGCC GGGGCAGGCC GTGACGCTGC AATTGCTCCC CGCCGAACGC AAAAAAAATG ACAAGATGGT CTATGCGTTG GAAGCCGAAC CGGTTTTGGC CGAGCGCGAG CGCAAGGAAG AAGACGTGCA CACGCTGCTG GACCTGGCCC GCAAGCTGGA AGGCCTGACG CGCAACGTCG GCATGCACGC CGGGGGGGTG TTGATTGCGC CCGGCAAGCT GACTGACTTT TGCCCGCTGT ATTTGCAGCC CGGCAGCGGC TCGGCGGTGA GCCAGTTTGA CAAAAACGAT GTGGAGGCGA TTGGCCTCGT CAAGTTCGAC TTTTTGGGCC TGGCCACGCT GACCATTCTG GAAATCGCCA GAGAGTTCAT CATTCAGCGC CACCCCTCGC AAAAAGATTT CAAATTTGAG AACCTATCGC TCAACGATGC GCGGGTTTAT GCACTGTTTG CCGAGGGCAA TACCGAAGCC GTTTTCCAGT TTGAAAGTAT CGGCATGCAG CGCATGCTCA AAGACGCCAA ACCGAACCGG CTCGAAGACC TGATCGCGAT GAACGCGTTG TACCGCCCCG GCCCGATGGA CCTGATTCCG ACCTACATTG CCCGCAAACA GGGCAAGGAA GTGCCCGAGT ACCCGGACCC CCGCGTCAAG CCGATTCTGG AGGAGACCTA CGGCATCATG GTCTACCAGG AGCAGGTGAT GCAGACCGCG CAGATATTGG GCGGTTACTC GCTGGGCGGT GCCGACATGC TGCGCCGCGC CATGGGTAAA AAAGATGAGA AAGAGATGGC TTCGCAGCGG GATATCTTCC GCAAAGGTGC AGGCGTCAAT GGCCTGACCC AGGAAAAAGC CGACGAAGTT TTTGACCTGA TGGAAAAGTT TGCGGGCTAC GGCTTCAACA AGTCGCACTC GGCCGCTTAC GCCCTGCTGG CCTACCACAC GGCCTGGCTC AAGGTGCACT ACACCGCCGA ATTCTTTGCG GCCAACATGA CCGTGGAGAT GGACGACACC GACAAGCTCA AAATACTGTT TGGCGATGCG CAAAAAATGG GCATCCAGTT CGAGTCGCCC GACATCAACC GCGGCGACTA CCGGTTTGAA CCCATCAGCG CTACCGCCGT GCGTTATGGC CTGGGTGCCG TCAAGGGCAC CGGCCAGCAG GCGATTGCGG CCATCGTGGC GGCTCGACAG GAAGGAGGGC CTTTCACCTC GCTCTACGAC TTCTGCGTGC GGGTCGACCG CAGCAAGCTG AACAAGCGCA CGGTGGAGGC GCTCATCAAG GGCGGGGCGT TTGACAACCT GCATCTGAAC CGTGCCGAGC TGCTGGCGTC GGTAGACCGT GCCTTCGAAT TTGCCGCCGC CACCGAGGCC AATGCCAACC AGGGCGGGCT GTTTGACATG TCCGACTCGC ATGCCGCCAG CACGCAGGAG CCGCCGCTGG TCGAGGCCGT GCCATTCGGT GTGAAGGCGC GTCTGGTACT TGAAAAAACC GCCATCGGTT TTTACCTGTC AGGCCACTTG TTCGATGAGG TCGAGGCCGA AGTGCGGCAG TTTGCCAAGC GCAAGATTGA AGACCTGATC GACTCCCGCG AGCCGCAGCT GCTGGCTGCC ATCCTCAGTG ACTTGCGCGT GATCAACGGC AACCGGGGCA AGCTGATCAT ATTCAAGCTA GACGACAAAA CCGATGTACT GGAAGCCTCG GTGGACGAGA CCGTCTTCAA CGCCAACCGC AACCTGCTGA AAGACGACGA GCTGGTGATT GTGCAGGGCA CGCTGCAGGG CGCCTCCGAG CGTTTCGGGC GGCGCTTCAA GGTCACGCAG GTGTGGGACC TTGAAACCGC GCGCTGCAAG TTCGGCAAAT ATTTGCGCGT GGCGGTCAAT GGCGCAGCGC CCGATATTTC ACGGCTGGTC CGCGACTTTC CACCGCGCCC CGAAATGACG GAGCAGGGGG AACTGAAGCG CGGTTTACCG GTGCGCCTGA GCCTGCGCCG ACAAGACGGC AGGGTGGGCG CCACCGCCGA ACTTCATCTG GGTGAAGCCG CCCGGTTCTT TCCGACCGAT GCCGCGCTGG CCAGCTGGAT GGCGCAGGCC GACCGGGGGC TGGTGCAGAT TGTTTATGAG TGA
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Protein sequence | MRVISKMRVG PSPKMKRMFV HLRIHTEFSV VDGTNRIDEI VQAAAADQQP ALAITDLSNL FGTVKFYKEG RGAGVKPLIG ADVWVQVPGK DAAAPAARLL LLVQNHRGYL NLSELLTRAW TRNVVRDQAV IKLEWLEELN EGLIALSGAQ GGAVGQALLQ GDDARALECA LHLAGLFPHR FYLELQRAQR PDDERHVAAA VQLAARLKLP VVATHPVQFL TYDDYEAHEA RVCIAEGEIL GNTRRVRKFT REQYFKSAAQ MTQLFADVPS ALANTLEIAR RCNLKLELGK PMLPDYPTPE VEGVRMPIDA YFRHASFEGL EERLAHLYPN EALRDQKRPV YVERLEFEIN TILKMGFPGY FLIVGDFINW AKNNGCPVGP GRGSGAGSLV AYALRITDLD PLQYNLLFER FLNPERVSMP DFDIDFCQSN RDRVIDYVKD KYGHDAVSQI VTFGTMAARA AIRDVGRVLD FPYGFCDGIS KLIPNKPGQA VTLQLLPAER KKNDKMVYAL EAEPVLAERE RKEEDVHTLL DLARKLEGLT RNVGMHAGGV LIAPGKLTDF CPLYLQPGSG SAVSQFDKND VEAIGLVKFD FLGLATLTIL EIAREFIIQR HPSQKDFKFE NLSLNDARVY ALFAEGNTEA VFQFESIGMQ RMLKDAKPNR LEDLIAMNAL YRPGPMDLIP TYIARKQGKE VPEYPDPRVK PILEETYGIM VYQEQVMQTA QILGGYSLGG ADMLRRAMGK KDEKEMASQR DIFRKGAGVN GLTQEKADEV FDLMEKFAGY GFNKSHSAAY ALLAYHTAWL KVHYTAEFFA ANMTVEMDDT DKLKILFGDA QKMGIQFESP DINRGDYRFE PISATAVRYG LGAVKGTGQQ AIAAIVAARQ EGGPFTSLYD FCVRVDRSKL NKRTVEALIK GGAFDNLHLN RAELLASVDR AFEFAAATEA NANQGGLFDM SDSHAASTQE PPLVEAVPFG VKARLVLEKT AIGFYLSGHL FDEVEAEVRQ FAKRKIEDLI DSREPQLLAA ILSDLRVING NRGKLIIFKL DDKTDVLEAS VDETVFNANR NLLKDDELVI VQGTLQGASE RFGRRFKVTQ VWDLETARCK FGKYLRVAVN GAAPDISRLV RDFPPRPEMT EQGELKRGLP VRLSLRRQDG RVGATAELHL GEAARFFPTD AALASWMAQA DRGLVQIVYE
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