| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2882 |
|---|
| Symbol | |
|---|
| ID | 4014457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3043380 |
|---|
| End bp | 3043778 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637942546 |
|---|
| Product | methylation |
|---|
| Protein accession | YP_549695 |
|---|
| Protein GI | 91788743 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4968] Tfp pilus assembly protein PilE |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.938712 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.364905 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTCG GCAAGCAAAA TGGGTTCACG CTGATCGAAC TGATGGTCAC GGTGGCTATC
GTCGGAATCC TGGCTGCGGT GGCCTATCCC TCCTACACCA GCCACATCAG GAAAGGCGTG
CGGCGGGCGG CCCAGGCTCA GATGATGGAT ATCGCCAATC GGGAGCAGCA ATACCTGCTG
GCCAACCGTA CTTTCGCCTC CTACGATACG TTGATGCTCA GTGGCTATTC GCTGCCCACT
GACCTCACTG CCAAGTACAC GCCCACGATC GCCCTGGTCG GCGGTACGAC TACGGCGCCC
GGATTCACCA TCACGTTCAC GGCCATTGGC GGCCAGGCCG AAGATGGCAA CCTGACGCTC
ACCAGCGAAG GGGTGAAGGA CCCGGTGGGC AAATGGTAG
|
|---|
| Protein sequence | MRVGKQNGFT LIELMVTVAI VGILAAVAYP SYTSHIRKGV RRAAQAQMMD IANREQQYLL
ANRTFASYDT LMLSGYSLPT DLTAKYTPTI ALVGGTTTAP GFTITFTAIG GQAEDGNLTL
TSEGVKDPVG KW
|
|---|
| |