| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2828 |
|---|
| Symbol | |
|---|
| ID | 4014517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 2977353 |
|---|
| End bp | 2980676 |
|---|
| Gene Length | 3324 bp |
|---|
| Protein Length | 1107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637942491 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_549641 |
|---|
| Protein GI | 91788689 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.376428 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.152401 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTCT CCGAACCCTT CGTCCGCCGC CCGGTCGCCA CCGTCCTCCT GACCATAGGC
ATCGCCCTGG CCGGCATAGG CGCATTCTTT GTACTGCCCG TCTCGCCCCT GCCGCAGGTC
GATTTCCCGG TCATCTCGGT CAGCGCCTCG CTGCCCGGCG CCAGCCCCGA CACCATGGCC
AGCAGCGTCG CCACGCCGCT GGAGCGGCGC CTCGGCGTGA TTGCCGGCGT GAACGAAATG
ACCTCCAACA GCGGCACGGG CTCCACCCGT GTCAGCCTGC AGTTTGACCT CAACCGCAGC
ATCGATGCCG CCGCGCGCGA AGTGCAGGCC GCCATCAATG CCTCGCGCGC GGACTTGCCG
GCCACGCTGC GCAGCAACCC GACCTACCGC AAGGCCAACC CGGCTTCGGC GCCCGTCATC
ATCCTGGCGC TCACCTCCAA AACCCGTTCA CCGGGGCAGA TCTACGACGA AGTGTCGAAT
GTGGTGCAGC AAAAAATCGC CCAGGTGCCG GGGGTGGGCG ATGTCGAGCT GGGCGGTGGT
TCGCTGCCTG CCGTGCGCGT CGAGTTGAAC CCGTTCGCCC TCAACCGCTA TGGCGTCAGC
ATGGAAGATG TGCGGGCGGC CCTGCAGGCA TCCAACGCCA ACCGGCCCAA GGGAGCGATT
GAAGGCAATG GCCAGCGACT GCAGATTTAC TCGGGCGCCA ACACCGCCAC GGGCGGGCTC
AAGGCGGCCG ACTACCGCGG CCTGGTGGTG GCCTGGCGCA ATGGCGCGGC CCTGCGGCTG
GGCGATGTGG CCGAGGTGGT GGATGGCGTG GAAAACACCA ACACCCTGGG CCTGTTCAAT
GGCAGCCCGG CCGTCATTGT GCTGATCACG CGTCAGCCCG GCGCCAACGT GATCGAGACC
GTGGATGGCG TGCGCGCCCT GCTGCCCGAG TTGCAGGCCC AGTTGCCGCA GGATGTGCAG
TTGCAGGTGG CCTCGGACAG TACCAACTCG ATACGCGCCT CGCTCCGCGA GATTGAGCTC
ACCCTGCTGA TCTCGATTGC ACTGGTGGTG CTGGTGGTCA GCGCATTTTT GCGCAGTGCG
CGCGCCACAG TCATTCCGGC GGTGGCCACC ATCGTCTCCC TGCTCGGCAC CTTTGGCGTG
ATGTATCTGC TCGGGTTCAG CCTCAACAAC CTGAGCCTGA TGGCGCTCAC CGTGGCCACC
GGCTTTGTGG TGGACGACGC CATCGTCGTG CTGGAGAACA CCAGCCGCCA CATCGAGGCC
GGCATGGACC GCTTCAAGGC CGCGCTGCTG GGTGCGCGCG AAGTCGGCTT CACGGTGCTG
TCCATCAGCC TGTCGCTGGT GGCGGTGTTC ATTCCGCTGC TGTTCATGGG CGGGCAAACC
GGACGGCTGT TTCGCGAATT TGCCGTGACG CTGTCGGCGG CGGTGATGAT TTCCCTGCTG
ATTTCGCTGA CCACCACACC GATGATGTGT GCCTGGATGC TCAAGCCCAC AACCGTGGCC
GGGCAGGCAC GCAAGCGGCC CGGGCGCCTG GCCTTCATCC CGCGCTGGCT TGAAAGCGCT
TATCAGCGTG TGCACCGCAG CTACGAGGTG AGCCTGGACT GGGCGCTGGC CAGCAAGCTG
CTGGTCATGC TGATTTTGCT GGCGGTGGTT GCGCTCAATG TCTACCTCTA CATCAAGGCG
CCCAAGGGCT TTTTCCCGCA ACAGGACACC GGGCAGATCA ACGCCGGCCT GCGCGCCGAC
AGGAGCATTT CCTTTCAGGC CTTGCAGGCC AAGCTGCGGC AGCTGGTCGA CATCATCCGG
CGCGACCCGG CGGTGGACAC CGTGGTCGGC TTCACCGGCG GCTCGCGAGC GGGTGGTGGC
TTCATGTTCA TCAACCTCAA ACCTGTGGCC CAGCGCACCG AATCCGGCCA AGCCGTCATT
GCCCGGCTGC GCCCGCAGCT GGCGCAAGTC ACTGGCGTCA GCCTTTTCCT CAACACCGTG
CAGGACCTGC GGGGTGGTGG CCGCCAGAGC AGTTCGACCT ACCAGTACAC CCTCAAAAGT
GACAACGCGG CCGACCTGCG CGACTGGGCG ACGCGGCTGG CCGACCAGAT GAAGCGCCAG
GACGCGCTGA CCGACGTGGA CACCGACCAG CAGGAAAACG GCGTGGAGAC CATGGTCACG
GTGGACAAGG ACAGCGCGGC ACGTCTGGGC ATCAGCTCGC GCGACGTCGA CAACGCCTTG
TACAACGCCT TCGGCCAGCG CCAGGTGGCC ACCATCTATG CCGACCTGAA CCAGTACCGG
GTGGTCATGG AGGTGGCGCC ACGCTTTATC CGCAGCCCCG AGGCGCTCAA GGACATCTAC
GTTCCGGCGA AGGCCAGCAG CCTCACCACT TCCGGCACAA ATTCAAGCAC CACCTCGGGC
ACCAGCTCCA CCACGACTAC CGCATCCGGC TCATCCGGTA CTTCCAGCGC ATCCACAACC
GTCATCAACC CGGCCTTGCG CGACCCGTCC AGCGGCCAGG CCCTGAGCTC GTCGGCCACC
ACCATGGTGC CGCTGTCGGC CATTGCGCGC TTCAGCGAAA ACGCCAAGGC CGCATCCGTC
AGCCACGAGG ACGGCGAACT CTCCACCACG ATTTCCTACA ACCTGGCGGA GGGCAGCACA
CTCAGCGATG CCCAGGCTGC CGTGAAACAG GCCGAAGCCG AGATTCGCCT GCCCAACAAT
GTGCGCGGCA GTTTTGCCGG ATCGGCGCGT GATGCCCAGG AATCGCAAAG CAAGCAGCCG
CTGCTGATAC TGGCCGCGCT GGTGGTGATC TACATCGTGC TTGGCATTTT GTACGAGAGC
CTGATCCATC CGATCACCGT GCTGTCTACC CTGCCCTCGG CTGGCGTGGG CGCGGTGCTG
GCGCTGCTGC TGTTCAAGAT GGACTTTTCC ATCATCGCGC TGATCGGCAT TTTCCTGCTG
ATCGGTATCG TGAAGAAAAA TGCCATCCTG ATCATCGACT TTGCGCTGGA AGCCGAGCGG
GCACGCGGCC TCACCGCCAC GCAGGCGGTG CGCGAAGCCT GCCTGCTGCG CTTTCGCCCC
ATCCTGATGA CCACGCTGGC CGCCATCCTC GGTGCGCTGC CGCTGGCCAT AGGCTTTGGC
GAGGGCGCCG AGTTGCGCCG CCCGCTGGGC GTCTCCATCA TTGGCGGGCT GATTGCCAGC
CAGCTGCTCA CCTTGTTGAC CACGCCGGTG GTTTATGTAC TGCTCGACAA GCTGCGCCAC
CGCAGCCCGT CCGAGAAGCA GCTGAGCCGC CATCCGGATG ACTCCAGCGA ACCGCCTTCC
GGCGCCCCGC TGCAACTGCA ATGA
|
|---|
| Protein sequence | MNLSEPFVRR PVATVLLTIG IALAGIGAFF VLPVSPLPQV DFPVISVSAS LPGASPDTMA
SSVATPLERR LGVIAGVNEM TSNSGTGSTR VSLQFDLNRS IDAAAREVQA AINASRADLP
ATLRSNPTYR KANPASAPVI ILALTSKTRS PGQIYDEVSN VVQQKIAQVP GVGDVELGGG
SLPAVRVELN PFALNRYGVS MEDVRAALQA SNANRPKGAI EGNGQRLQIY SGANTATGGL
KAADYRGLVV AWRNGAALRL GDVAEVVDGV ENTNTLGLFN GSPAVIVLIT RQPGANVIET
VDGVRALLPE LQAQLPQDVQ LQVASDSTNS IRASLREIEL TLLISIALVV LVVSAFLRSA
RATVIPAVAT IVSLLGTFGV MYLLGFSLNN LSLMALTVAT GFVVDDAIVV LENTSRHIEA
GMDRFKAALL GAREVGFTVL SISLSLVAVF IPLLFMGGQT GRLFREFAVT LSAAVMISLL
ISLTTTPMMC AWMLKPTTVA GQARKRPGRL AFIPRWLESA YQRVHRSYEV SLDWALASKL
LVMLILLAVV ALNVYLYIKA PKGFFPQQDT GQINAGLRAD RSISFQALQA KLRQLVDIIR
RDPAVDTVVG FTGGSRAGGG FMFINLKPVA QRTESGQAVI ARLRPQLAQV TGVSLFLNTV
QDLRGGGRQS SSTYQYTLKS DNAADLRDWA TRLADQMKRQ DALTDVDTDQ QENGVETMVT
VDKDSAARLG ISSRDVDNAL YNAFGQRQVA TIYADLNQYR VVMEVAPRFI RSPEALKDIY
VPAKASSLTT SGTNSSTTSG TSSTTTTASG SSGTSSASTT VINPALRDPS SGQALSSSAT
TMVPLSAIAR FSENAKAASV SHEDGELSTT ISYNLAEGST LSDAQAAVKQ AEAEIRLPNN
VRGSFAGSAR DAQESQSKQP LLILAALVVI YIVLGILYES LIHPITVLST LPSAGVGAVL
ALLLFKMDFS IIALIGIFLL IGIVKKNAIL IIDFALEAER ARGLTATQAV REACLLRFRP
ILMTTLAAIL GALPLAIGFG EGAELRRPLG VSIIGGLIAS QLLTLLTTPV VYVLLDKLRH
RSPSEKQLSR HPDDSSEPPS GAPLQLQ
|
|---|
| |