Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2776 |
Symbol | cbiD |
ID | 4014580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 2917875 |
End bp | 2918996 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637942440 |
Product | cobalt-precorrin-6A synthase |
Protein accession | YP_549590 |
Protein GI | 91788638 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1903] Cobalamin biosynthesis protein CbiD |
TIGRFAM ID | [TIGR00312] cobalamin biosynthesis protein CbiD |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0736251 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAA AAGACGCGCC CCGCGGCACC CGCACTGGTT TCACCACCGG TGCGTGTTCT GCTGCGGCGG CGCGTGCGGC GGTGATTGGC CTGGTTACCG GTCAGGTGCC CGACGCGGTG GAATGCCTGC TGCCCAATGG CGACCTGGTG ACCTTCGCCG TGCAGGATGG CCGCGTTGAG GGCGTGGGTG GAGGCGTGGG TGGGGGTGTA TCAGCCCACG CCATGGTCAT CAAGGACGCG GGCGATGACC CGGATTGCAC CGACAAAGCG CACCTCACCG CCGATGTGCG GCTGCGCCAC GATCTGCCGG GCCAGGTGTT GCTAGCCGGT GGTTTTGGCG TGGGCACGGT CACCATGCCG GGCCTGGGTC TGGCGGTGGG CGGCCCGGCC ATCAACCCGG TGCCGCGCCG CAACATCGAG GCCAATGTGC GTGCCGTGGG GCAGGGCCTG CTGGATGAAG TGGGTCTGGA AGTGACCATT TCCGTGCCGC AGGGCGAGGA GATGACCAAG AAGACCTTGA ACGCGCGGCT GGGCATTCTG GGTGGCATCT CCATCCTGGG CACTACCGGC ATCGTGAAGC CGTATTCCAC TGCCGCCTAC CGCGCCAGCG TGGTGCAGGG CGTGCAGGTA GCCGGCACGC TGGGCCACGG CGTGGTGGTG CTCACCACCG GTGGGCGTAC CGAAAAGTTT GTGATGGAAG AAATGCCCGA ACTGCCCGAA CCCGCGTTCG TGCAGATGGG CGACTTCCTG CGCTACGCCA TGGGTGCGGC AGTCAAGGCG GGCCTGAAGA AAGTCGTCAT CGGCGGCATG GTCGGCAAGC TCACCAAGAT TGCCCAAGGC GAAACCATCA CCCACGCGGG CCGGGCCGAG GTGGACACAG GGTTGCTGGC CGAACTCGCT GCCAGCGTGG GCGCACCGCC CGACGTCTGC GACGCCATCC GTGGCAACGA AACCGCCCGC TATGCCGGCG AGCGCATGGA CGCGCTGGGC CTGGGGCAGG CTTTTCACAC CGCGCTGGCG CAGCGGGTCA TACAGACCCT GCGCACGCGT TACCCCGATC AATTTGAACT GAAAGTGCTG GTCTGCGACT TTGACGGTCG CAAGATTGCG GAGGCCTCTT GA
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Protein sequence | MMKKDAPRGT RTGFTTGACS AAAARAAVIG LVTGQVPDAV ECLLPNGDLV TFAVQDGRVE GVGGGVGGGV SAHAMVIKDA GDDPDCTDKA HLTADVRLRH DLPGQVLLAG GFGVGTVTMP GLGLAVGGPA INPVPRRNIE ANVRAVGQGL LDEVGLEVTI SVPQGEEMTK KTLNARLGIL GGISILGTTG IVKPYSTAAY RASVVQGVQV AGTLGHGVVV LTTGGRTEKF VMEEMPELPE PAFVQMGDFL RYAMGAAVKA GLKKVVIGGM VGKLTKIAQG ETITHAGRAE VDTGLLAELA ASVGAPPDVC DAIRGNETAR YAGERMDALG LGQAFHTALA QRVIQTLRTR YPDQFELKVL VCDFDGRKIA EAS
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