Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2715 |
Symbol | |
ID | 4014635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 2860797 |
End bp | 2861306 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637942379 |
Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
Protein accession | YP_549529 |
Protein GI | 91788577 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.02743 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCCG TGCCGTCCAC CCCAGCCAAC CCGCTTCCCC ATTTCCGTAT CGGCGAAGGC TGGGACACGC ACGCACTCGT TGCCGGGCGC AAGCTCATCA TCGGCGGCGT CGAGATTCCG CACCCGGTGG GCTTGCTGGG GCATTCGGAT GCCGATGTAC TGCTGCATGC CATTACCGAC GCCTTGCTGG GCGCTGCCGG GCTGGGTGAC ATTGGCAGCC ATTTCCCGGA CACCGATGTG CGTTTCAAAG GCGCCGATTC GATGGTGCTG CTGGCTGAGG CCGGGCGGCT GCTGGCCGAT CGGGGCTACA GTATCGGCAA CATAGACAGC ACCGTCATTG CGCAGGCCCC CAAACTGGCG CCGCACATCC TCGCTATGCG CGCGCGGATC GCACAGGCAC TGGGCCTGGA ACCGGGGCAG GTGAATGTCA AGGCCAAGAC CGCCGAGAAG ATGGGACCGG TCGGGGAGGG CCGGAGCATG GAGGCTCGTG CCGTGGTGTT GCTGTATTGA
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Protein sequence | MNSVPSTPAN PLPHFRIGEG WDTHALVAGR KLIIGGVEIP HPVGLLGHSD ADVLLHAITD ALLGAAGLGD IGSHFPDTDV RFKGADSMVL LAEAGRLLAD RGYSIGNIDS TVIAQAPKLA PHILAMRARI AQALGLEPGQ VNVKAKTAEK MGPVGEGRSM EARAVVLLY
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