Gene Bpro_2715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_2715 
Symbol 
ID4014635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp2860797 
End bp2861306 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content65% 
IMG OID637942379 
Product2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_549529 
Protein GI91788577 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.02743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCG TGCCGTCCAC CCCAGCCAAC CCGCTTCCCC ATTTCCGTAT CGGCGAAGGC 
TGGGACACGC ACGCACTCGT TGCCGGGCGC AAGCTCATCA TCGGCGGCGT CGAGATTCCG
CACCCGGTGG GCTTGCTGGG GCATTCGGAT GCCGATGTAC TGCTGCATGC CATTACCGAC
GCCTTGCTGG GCGCTGCCGG GCTGGGTGAC ATTGGCAGCC ATTTCCCGGA CACCGATGTG
CGTTTCAAAG GCGCCGATTC GATGGTGCTG CTGGCTGAGG CCGGGCGGCT GCTGGCCGAT
CGGGGCTACA GTATCGGCAA CATAGACAGC ACCGTCATTG CGCAGGCCCC CAAACTGGCG
CCGCACATCC TCGCTATGCG CGCGCGGATC GCACAGGCAC TGGGCCTGGA ACCGGGGCAG
GTGAATGTCA AGGCCAAGAC CGCCGAGAAG ATGGGACCGG TCGGGGAGGG CCGGAGCATG
GAGGCTCGTG CCGTGGTGTT GCTGTATTGA
 
Protein sequence
MNSVPSTPAN PLPHFRIGEG WDTHALVAGR KLIIGGVEIP HPVGLLGHSD ADVLLHAITD 
ALLGAAGLGD IGSHFPDTDV RFKGADSMVL LAEAGRLLAD RGYSIGNIDS TVIAQAPKLA
PHILAMRARI AQALGLEPGQ VNVKAKTAEK MGPVGEGRSM EARAVVLLY