| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2603 |
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| Symbol | hfq |
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| ID | 4014752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2733591 |
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| End bp | 2733860 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637942265 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_549417 |
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| Protein GI | 91788465 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0475975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.513903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAACACGG AAAATATCGT GAGCAATAAC AAAGGTCAGC TGCTGCAGGA CCCGTTTCTC
AACACCTTGC GTCGGGAGCA TGTTCCTGTT TCCATTTATC TCGTCAACGG GATCAAATTG
CAGGGCCAGA TTGAGTCTTT CGATCAATAT GTGGTTCTGC TGCGCAATAC CGTGACCCAA
ATGGTCTACA AGCATGCGAT CTCAACCATC GTTCCCGGAC GCGCTGTGAG TTTTGCGACC
GGCGAATCCG AAGAAAGCCC CGCCAGCTGA
|
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| Protein sequence | MNTENIVSNN KGQLLQDPFL NTLRREHVPV SIYLVNGIKL QGQIESFDQY VVLLRNTVTQ
MVYKHAISTI VPGRAVSFAT GESEESPAS
|
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