| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2580 |
|---|
| Symbol | |
|---|
| ID | 4014768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 2702585 |
|---|
| End bp | 2703280 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637942242 |
|---|
| Product | Crp/FNR family transcriptional regulator |
|---|
| Protein accession | YP_549394 |
|---|
| Protein GI | 91788442 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.117752 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTTTG AAGCTGCCCT CGCCCACCAC CGCTTCCTCA GCGGTCAGTC CTGGTTTGCC
GACCTGCCAG CCGACGCACA GACCCGGCTG CTTGAGCGGA CATTCACCAT AGCTGGGCAC
AAAGGTGATG TCCTGCTGGC GGCTGGCGAG CCCGTCAAGG GCTGGTATGC CGTGCTGTCG
GGTCTGGTCA AGCTGCAGAG CAAGTCGGCT GAAGGACGGG TGTCGGCCTT CCTGGGTGTG
CCTGACGGTG AATGGTTTGG CGAGGGCTCG ACACTCAAAA CCGAGCCGCG CCGCTACGAC
GTGATTGCTT TGCGCGACAC CACGCTGCTG TGCCTGCCGC GGACCCAATT CAACGAATTG
CTTGCAAGCA GCCTGCCCTT CAACCACTTT CTGGTGGCCC ACCTGAACCG GCGCCTCGGG
CAGGCCATGA CCATCATCGA GGCAGGCCGC CTGCGCGCCC CGGAGCAGCG CGTGGCCCTG
TATTTGAGCC GTGTTTTCTG GCAGGGGCGG CGCAAGCTCC TGCTGTCGCA GGAGGAGCTG
GGACACCTCG CCGGACTGTC ACGACAAACC GTCAACCGGG CCCTGCAGAC CCTCGAGGCG
CAGGGGCTGG TGTCGCTCGA GTTCGGCCGC GTGGCCATAC TGGACGAGCA GGCGCTCGCG
TCCTGCGCCG CCCGGCCAGC GACAGACACG GTTTAA
|
|---|
| Protein sequence | MPFEAALAHH RFLSGQSWFA DLPADAQTRL LERTFTIAGH KGDVLLAAGE PVKGWYAVLS
GLVKLQSKSA EGRVSAFLGV PDGEWFGEGS TLKTEPRRYD VIALRDTTLL CLPRTQFNEL
LASSLPFNHF LVAHLNRRLG QAMTIIEAGR LRAPEQRVAL YLSRVFWQGR RKLLLSQEEL
GHLAGLSRQT VNRALQTLEA QGLVSLEFGR VAILDEQALA SCAARPATDT V
|
|---|
| |