Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2556 |
Symbol | |
ID | 4014783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 2677361 |
End bp | 2678338 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637942218 |
Product | type II secretion system protein |
Protein accession | YP_549370 |
Protein GI | 91788418 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4965] Flp pilus assembly protein TadB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.460971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.349812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTATC TCTACTACCT TTTTGCCACG CTGATTTTCA TTGCGGTGGT CCTTCTGGTT GAGGGCCTGT ACCTCAGCTG GAACTCTACC AAGGGGCCTG AAGCCGAGCG TGTGGCGCGT CGCCTGCGCG TCATGTCGGC GGGCGGACAC GGTGATGCGC AAAGTATTTC CATTACCAAG GAACGACTGC TGAGCGAAAC GCCAGTCATG CAGCGCATTT TGCTGGGGGT TCCGCGCGTT GGCACGCTGG ACCGCCTGCT CCAGCAGTCA GGGCTGTCCT GGAGTGTGGG CGAATTCCTC GGAATGGCAT TGATTGCCTT CCTGGTTGTT TTCTTTGCAG GCAGTTACCT TGCCGTGCCC TTGCTGCTGC GGCTGGCGCT GGCGGGCGCT GCTGCCCTGC TCCCATTTCT TTATGTCACG AGAGCCAAGC GCAAGCGTCT GGATCGCATC GAGCACCAAC TGCCTGATGC GCTGGACTTG ATGGGCCGCG CCTTGCGCGC CGGCCACGCC TTTCCGACGG CGCTGAAGAT GGTGGGCGAC GAGATGAACG ACCCCTTGGC CGGAGAATTT CGCATCGCTT TTGACGAGGT GAACTTTGGC ATTGCCATGC CGGATGCCCT GATGAACATG GCCACGCGGG TACCCAGCAC CGATCTGCGC TACTTTGTGA TTGCCGTGCT GATCCAGCGG GAAACGGGCG GCAATCTTTC AGAATTGTTA ACGAGTATCA GCGCCATCAT CCGGGACCGG ATCAAGCTGA TGGGGCAGGT ACGGGTGCTG TCTGCCGAGG GCAAGATGTC AGCCTGGGTG CTGTCTCTGC TGCCGTTCGG AGCGGCATTC ATGATCCAGC TGACGAACCC CAAGTTTCTT GAGGTGCTGT ATACCGACCC CGCAGGCCGC AAGATGCTCG CCGCCGCCAT CGTCATGATG GCGCTCGGCA TCCTGGTCAT GCGCAAGATC ATTCGAATCC GGGTGTGA
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Protein sequence | MDYLYYLFAT LIFIAVVLLV EGLYLSWNST KGPEAERVAR RLRVMSAGGH GDAQSISITK ERLLSETPVM QRILLGVPRV GTLDRLLQQS GLSWSVGEFL GMALIAFLVV FFAGSYLAVP LLLRLALAGA AALLPFLYVT RAKRKRLDRI EHQLPDALDL MGRALRAGHA FPTALKMVGD EMNDPLAGEF RIAFDEVNFG IAMPDALMNM ATRVPSTDLR YFVIAVLIQR ETGGNLSELL TSISAIIRDR IKLMGQVRVL SAEGKMSAWV LSLLPFGAAF MIQLTNPKFL EVLYTDPAGR KMLAAAIVMM ALGILVMRKI IRIRV
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