Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2471 |
Symbol | |
ID | 4014854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 2585628 |
End bp | 2586530 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637942136 |
Product | 3-hydroxyisobutyrate dehydrogenase |
Protein accession | YP_549288 |
Protein GI | 91788336 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.657669 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00450242 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAAATCG CATTTATAGG CCTCGGCAAC ATGGGCGCAC CCATGGCCCT GAACCTGCAC AAGGCGGGCC ACCAGGTCGC CGCCTTTGAC CTGTCCGATG AAGCCTGCCA GCGGCTGGGC AACGAGGGCG TGCGCATTGC CGACTCCGCC AGCAATGTGG TGCGCGGTGT TGAAGTCGTC ATCAGCATGT TGCCCGCCAG CCAACATGTG GAGGCACTCT ACCTCGGCAA TGGTTTGGGC CATGGACAAG CGGGCCTGCT GAGGCAGTTG CCGGCCGGCA CGCTGGTGAT TGACTGCAGC ACGATTGCCG CGACAAGCGC CCGCAAGGTC GCTGACGCTG CGGCAAAGTT GCAGATTGCC TGCGTAGACG CGCCGGTGTC CGGCGGCACC GGCGGCGCCA TCGCCGGCAC GCTGACCTTC ATGGTGGGCG GCGTGACCCG CGACCTGGAG CGCGCACGAC CGCTGCTGGA GACCATGGGG CAAAACATTT TCCACGCGGG CGAAGCCGGT GCGGGTCAGA CCGCCAAGAT CTGCAACAAC ATGCTGCTCG GCATTTTGAT GATAGGTACC TCGGAAGCGC TGGCCTTGGG CGTGGCCAAC GGGCTGGATG CCAAGGTGCT GTCCGAGATC ATGCGGCGCA GCTCGGGCGG CAACTGGGCG CTGGAAAAAT ACAACCCCCT GCCCGGCGTG ATGGAGAACA CGCCCGCCTC CCGGGGCTAC GCCGGCGGCT TTGGCACCGA CCTGATGCTG AAAGACCTGG GCCTGGCGCA GGAGAACGCC AGCGCCGTGC GCGCCGCCAC GCCGCTGGGC GGCCTGGCCC GCAGCCTCTA TGCGGCGCAC AGCCTGGCCG GCAGCGGCGC GCTGGACTTC TCCAGCGTGA TCCGGCTGCT GCAGGGCAAA TAA
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Protein sequence | MKIAFIGLGN MGAPMALNLH KAGHQVAAFD LSDEACQRLG NEGVRIADSA SNVVRGVEVV ISMLPASQHV EALYLGNGLG HGQAGLLRQL PAGTLVIDCS TIAATSARKV ADAAAKLQIA CVDAPVSGGT GGAIAGTLTF MVGGVTRDLE RARPLLETMG QNIFHAGEAG AGQTAKICNN MLLGILMIGT SEALALGVAN GLDAKVLSEI MRRSSGGNWA LEKYNPLPGV MENTPASRGY AGGFGTDLML KDLGLAQENA SAVRAATPLG GLARSLYAAH SLAGSGALDF SSVIRLLQGK
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