| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2426 |
|---|
| Symbol | infB |
|---|
| ID | 4014925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 2526861 |
|---|
| End bp | 2529767 |
|---|
| Gene Length | 2907 bp |
|---|
| Protein Length | 968 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637942091 |
|---|
| Product | translation initiation factor IF-2 |
|---|
| Protein accession | YP_549243 |
|---|
| Protein GI | 91788291 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0271781 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGTA CCACTACCGT CGCTGAATTC GCAGCTGAAT TGAATAAACC CACCGCCACC
CTGATCGAGC AGTTGACCAG CGCGGGCGTC GCCAAGGTGC AGGCCAGCGA CCACCTGTCA
GAAGTCGACA AGCAGAAGCT GCTTGGCTAT CTGCAGGCCA GCCATGGCAC CGTGACGGCC
GAGCGAAAAA AAATCACGCT GGTGAAGAAA TCCACCACCG AGATCAAGCA GGCTGACGCC
ACGGGCAAGG CTCGTACCAT CCAGGTGGAG GTTCGCAAGA AACGAACCTT CGTCAAGCGA
GAGGACGGCT CTGACCTGCC TGCCGAGGAA GTTCAACCTG AAGTGGTGGC TGCGCCGCAG
GTTCCCGTGA TTGATGACGC CGAACTGATT CGCCGTGAAG AAGAAGCGAG CCGCCACGCC
GAATTGCTGC GCCGCCAGGA AGCAGAACTG GCAGAAAAGC GCCGTTTGCG GGAAGAGCTG
GATGCCAAAG AAGCCGCCCG CGAACTGGAA CGCCAGGCTG CGGCGGAAAG CGCCAAGGCA
GCCGCCGAGG CGGCTGAAGC CGCCAAAAAA GCCAAGCCCG TGACCGGGAA GGCCAAGGAA
GTGGCCCAGC CTGCCGGCGC CGAGGCTTCC CGTGCTGCAG CCGAGACAGC GGTCGCAGAA
GAAGCGGCCG CCACCAAGGC TGCCGATGCT GCAGTTGTAC AGGCCGCTGC CAAGGCCAAG
GCCACGGCAG AATTCCAGGC CGATGCCGCC AAGGCACAGG ACCTGCAGGA ACGTCGTCGC
AAGGCCGAGG CCGAAGCCGC GGGAATTCGG GCAATGATGT CTGCGCCCAA GCGCGTACTG
GTTCCGCATG TGGATCCCAA GGCCGCCATC AAGGGCACCT TGCACAAGCC AGCGGTTGCG
CCAGGCGCAG CCAAGCCCGC CGCAGCGGCG GGAGCACCGG GTGCACCGGG TGCTGCAGGC
AAAAAGGAAG TCAAGTCGGA GAACCTTTCT TCGACCTGGA AAGACGACGC CGCCAAGAAA
AAGGGCATTC CCAGCCGTGG TGCGACGGCG GTTCCCGGAC GCGGAAACTT CCGCAGCGGC
CCGCGTGGCC GTCGCAGCAA CGATCGCGAT GCCCGTCCCG AGTCCACCTT CGTCGCGCCC
ACAGAGTTCA AGGTGATCGA GGTTCATGTG CCCGAGACCA TCACCGTGGC GGAACTGGCG
CACAAGATGA GCGTCAAGTC CTCTGAGGTG ATCAAGCATC TGATGAAGCT CGGCCAGATG
GTCACCATCA ACCAGCCGCT GGACCAGGAC ACTGCCATGA TCGTGGTGGA GGAAATGGGC
CACAAGGCGA TTACCGCCGC GCTGGATGAT CCGGAAGCGT TCACCGACGA CGACGTGCAG
GGCCAGCAGG CAGAAGCGCT GCCGCGCGCG CCGGTGGTGA CCGTCATGGG TCACGTCGAC
CACGGAAAAA CTTCGCTGCT CGACTACATC CGCCGCGCGA AAGTGGCCGC AGGTGAGGCC
GGCGGCATTA CCCAGCACAT TGGTGCGTAC CACGTGGAAA CGCCACGCGG CATGATCTCC
TTCCTGGACA CGCCGGGTCA CGAGGCGTTC ACCGCCATGC GTGCCCGTGG CGCGCAGGCG
ACCGATATCG TGATTCTGGT GGTGGCCGCT GATGACGGCG TGATGCCGCA AACCAAGGAG
GCTATCAAGC ACGCCAAGGC AGCCGGCGTT CCCATCGTGG TGGCGATCAA CAAGATCGAC
AAGGCTGATG CCAACATGGA CCGGGTCAAG GGCGAACTGG TCACCGAAGA AGTCATTCCG
GAAGAGTTTG GCGGCGAATC TCCATTCGTG GGCGTATCAG CCCGTACCGG CGAAGGTGTC
GACACGCTGC TGGAGCAGGT GCTGCTGCAG GCCGAGGTGC TGGAGCTCCG CGCGCCGGTG
GAAGCACTGG CCAAGGGCCT GGTCATTGAA GCCCAGCTCG ACAAGGGCCG GGGCCCGGTC
GCTACCGTGC TGATTCAGTC CGGCACGCTG AAAACCGGTG ACGTGGTGCT GGCCGGCTCG
ACCTATGGCC GCGTGCGTGC CATGCTCGAC GAGAACGGCA AACCGATCAA GACCGCGGGT
CCTTCCATTC CGGTGGAGAT TCAGGGTCTG ACCGAAGTGC CTCAGGCCGG TGACGAATTC
ATGGTGATGA CGGACGAGCG CCGCGCCCGC GAAATCGCCA CCTACCGCGC CGGCAAGTTC
CGCAATACCA AGCTGGCCAA GCAGCAGGCT TCCAAACTGG AAAACATGTT TTCCGACATC
TCGGCCGGCG AGGTCAAGAT GCTGCCCATC ATCATCAAGG CCGATGTGCA GGGCTCACAG
GAGGCGCTCG CGCAGTCGCT GCTCAAGCTC TCGACCGATG AGGTCAAGGT TCAGCTGGTT
TACTCCGGCG TCGGTGGTAT TTCTGAATCC GACGTGAACC TGGCCATTGC GTCCAAAGCC
GTGCTGATCG GGTTCAACAC CCGTGCCGAC GCGCAGGCGC GCAAACAGGC CGAGAACAAT
GGCATCGACA TTCGCTACTA CAACATCATT TATGACGCTG TGGACGAGCT CAAGGCCGCC
ATGTCAGGCA TGCTGACGCC CGACAAGAAG GAAGAAGTCA TTGGTACCGC CGAGATCCGC
CAGGTGTTCA AGGTCAGCAA GATCGGCTCG ATCGCCGGCT GTATGGTCAC CGCGGGCATT
GTTCGCCGCA CGGCCCGGTT GCGCCTGTTG CGTGACAACG TGGTCATCTT CACGGGTGAA
CTCGACTCGC TCAAGCGCTT CAAGGACGAC GTCAAGGAAG TCAAGGAAAG CTTTGAGTGC
GGCTTGAACA TCAAGAACTA CAACGACATC CAGGAAGGCG ATATTCTGGA GTTCTTCGAG
ATCAAGGAAG TGGCTCGTAC CTTGTAA
|
|---|
| Protein sequence | MSSTTTVAEF AAELNKPTAT LIEQLTSAGV AKVQASDHLS EVDKQKLLGY LQASHGTVTA
ERKKITLVKK STTEIKQADA TGKARTIQVE VRKKRTFVKR EDGSDLPAEE VQPEVVAAPQ
VPVIDDAELI RREEEASRHA ELLRRQEAEL AEKRRLREEL DAKEAARELE RQAAAESAKA
AAEAAEAAKK AKPVTGKAKE VAQPAGAEAS RAAAETAVAE EAAATKAADA AVVQAAAKAK
ATAEFQADAA KAQDLQERRR KAEAEAAGIR AMMSAPKRVL VPHVDPKAAI KGTLHKPAVA
PGAAKPAAAA GAPGAPGAAG KKEVKSENLS STWKDDAAKK KGIPSRGATA VPGRGNFRSG
PRGRRSNDRD ARPESTFVAP TEFKVIEVHV PETITVAELA HKMSVKSSEV IKHLMKLGQM
VTINQPLDQD TAMIVVEEMG HKAITAALDD PEAFTDDDVQ GQQAEALPRA PVVTVMGHVD
HGKTSLLDYI RRAKVAAGEA GGITQHIGAY HVETPRGMIS FLDTPGHEAF TAMRARGAQA
TDIVILVVAA DDGVMPQTKE AIKHAKAAGV PIVVAINKID KADANMDRVK GELVTEEVIP
EEFGGESPFV GVSARTGEGV DTLLEQVLLQ AEVLELRAPV EALAKGLVIE AQLDKGRGPV
ATVLIQSGTL KTGDVVLAGS TYGRVRAMLD ENGKPIKTAG PSIPVEIQGL TEVPQAGDEF
MVMTDERRAR EIATYRAGKF RNTKLAKQQA SKLENMFSDI SAGEVKMLPI IIKADVQGSQ
EALAQSLLKL STDEVKVQLV YSGVGGISES DVNLAIASKA VLIGFNTRAD AQARKQAENN
GIDIRYYNII YDAVDELKAA MSGMLTPDKK EEVIGTAEIR QVFKVSKIGS IAGCMVTAGI
VRRTARLRLL RDNVVIFTGE LDSLKRFKDD VKEVKESFEC GLNIKNYNDI QEGDILEFFE
IKEVARTL
|
|---|
| |