| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2420 |
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| Symbol | |
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| ID | 4014919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2518410 |
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| End bp | 2520215 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637942085 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_549237 |
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| Protein GI | 91788285 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02019] bacteriochlorophyll 4-vinyl reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0712361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCC TGCTGGTCGG CCTTGCTTTA TTCGCGCCGG CTTCCCGGGC TGCATATGCC
TACGCCCAGT TTGGCGACAT TAAATACCCG CCGGGCTTTA CCCATTTTGA TTATGTGAAC
CCGGCTGCGC CCAAGGGGGG CGAGATTCGC ATGGTGCCGC CCACCCGGCC CACCAACTTT
GACAAGTTCA ACCCGTTCAC GCTGCGCGGA ACTGCCCCCT ACGGGCTGGG AATCCTGCTG
ATTGAAAGCC TGCTGACCGG CAACTCCGAA GAGCCCACAA CGGCCTACGG ATTGCTGGCT
GACGACGTGG AGGTGGCGGC AGACAAATTG TCGGCGACCT TTCGTATCAA CAACAAGGCA
CGTTTTCACG ATGGCACGCC CGTGCTGGCG GCTGATGTGC TGCATTCGTA CACCCAGCTC
ATCAGCAAAC TTGCCGCGCC CCAGTACCGC ACGATTTACG CTGAAGTCAA GGGGGTGACT
GTGGTCTCGG AGCGCGTCGT GCGCTTTGAG TTCCTGACGC CAAATCCCGA ACTGCCGCTG
GTCGTCGGCG GAATGCCGGT GTTCAGCCGG GGCTGGGGCC GGGAGGGAGG CAAGGTCAAC
GGGGCCAGCA AGCCTTTCGA CCAGATCGTT TCGGAAATAC CCATAGGCTC CGGGCCCTAC
AAAATCGCCA ATCCGGCCAT GGGCCGTGAC ATCACCTATG TGCGGGACCC GGCCTATTGG
GGTGCGGATT TGCCGACACG CAAGGGGCAG TTCAATTTTG ACCTCATCAG CTTTAAGATT
TACCTGGACG AAACCTCCCG CTTCGAGGGC CTGAAGGCCG GTGAGTTCGA TTTCCTGCGC
GAATTCATCT CGCGCAACTG GGCGCGCCAG TACACCGGCA AGCAGTTCAC CTCGGGCGAA
CTGGTCAAGC GCGCATTTCC AAATCGCAAC CCCGGCGACT TCCAGGGTTA TGTGTTCAAT
CTGCGCAATC CGAAGTTCCA GGATGTGCGG GTGCGCAAGG CGATCGGCCT GGCGCTGGAT
TTCGAGTGGA TGAACCGGCA GCTGTTCTAT GGCATCTACA AACGCGTGGA CGGCTACTTT
CCCAACAGCG AGTTTCACGC GGAGGGCCTG CCCAAACCGG ATGAACTGGC CTTGCTCCAG
CCTCTGCGCG CCCAACTCAA ACCAGAGGTG TTCGGCGCCG TACCCGTGTC GCCCAGCACC
ACGCCGCCCG GCAGCCTGCG CGAGAACCTG CGCCAGGCCC AGGCGTTGCT GCGCGAGGCC
GGCTGGACTT ACCGTGACGG TGCGCTGCGC AATACCAGGG GCGAGGCCTT CACGATGGAG
TTCCTGAACG ACCAGCCCTC CCTGATACGC ATCGTCGGGC CGTTCCAGAA AGCGCTGGAA
AAGCTGGGCA TCACCATGAC ATACCGGGTC GTGGATTTTT CGTTGTCCAA ACAGAAGATG
GATGCTTTTG ACTTCGAAGT CACCACGTTG CGCCTGCCCG GCAGTACCGC ACCGGGCGGC
GAGTTGCTGG AGCTGTTTGG CTCGAAGGCG GCCCAGACAC CGGGCTCCTC GAACGTCTGG
GGCATTGCCG ATCCGGCGGT CGATGCCCTG CTGCAAAAAG TCGTGACCGC CAAAACCCGG
CCTGAACTGG GTGCCGCCAT GCGCGCGCTG GACCGCGTGC TGACCCACGG CTACTACTCG
GTGCCGCAGT ACTACGGCGA TGCGTTCCTG ATCGGCTACC GCCCGGGTCG CTTTGTCCTG
CCGCAGACGA TTCCGCCGTA TTACCAGGCG GACACCTGGG CCATGAGCAC CTGGTGGAGT
AAATGA
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| Protein sequence | MTTLLVGLAL FAPASRAAYA YAQFGDIKYP PGFTHFDYVN PAAPKGGEIR MVPPTRPTNF
DKFNPFTLRG TAPYGLGILL IESLLTGNSE EPTTAYGLLA DDVEVAADKL SATFRINNKA
RFHDGTPVLA ADVLHSYTQL ISKLAAPQYR TIYAEVKGVT VVSERVVRFE FLTPNPELPL
VVGGMPVFSR GWGREGGKVN GASKPFDQIV SEIPIGSGPY KIANPAMGRD ITYVRDPAYW
GADLPTRKGQ FNFDLISFKI YLDETSRFEG LKAGEFDFLR EFISRNWARQ YTGKQFTSGE
LVKRAFPNRN PGDFQGYVFN LRNPKFQDVR VRKAIGLALD FEWMNRQLFY GIYKRVDGYF
PNSEFHAEGL PKPDELALLQ PLRAQLKPEV FGAVPVSPST TPPGSLRENL RQAQALLREA
GWTYRDGALR NTRGEAFTME FLNDQPSLIR IVGPFQKALE KLGITMTYRV VDFSLSKQKM
DAFDFEVTTL RLPGSTAPGG ELLELFGSKA AQTPGSSNVW GIADPAVDAL LQKVVTAKTR
PELGAAMRAL DRVLTHGYYS VPQYYGDAFL IGYRPGRFVL PQTIPPYYQA DTWAMSTWWS
K
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