Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2390 |
Symbol | |
ID | 4014965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 2484026 |
End bp | 2485882 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637942056 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_549209 |
Protein GI | 91788257 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.868312 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGCGCTG GCGCACGGAC TTTTCACAGC GCATCTGTAA GACTTCCGGA GTCTTCGAAA GACTTCGCAC ACCCCCGGCC AGGACCCTGG AAGCGCCCCC CACAGTCGGC ACTTCGCAGG ATCGTCGTTA CTTTTACAGG AACATGGCCC ATGTCACCCA TTTCAAATCT GAGCGTTCTT GACGCCATTG CCAAAGCCGA CGGGATAGAG GTCAAGCGCC AGGAAGCCCT GCTCAAGACC GGCGCGCTGC AGACCGCCAT CCTGACCAGC GAAAATTTCT CCATCATCGC GACCGACGAG AAAGGCATCA TCCAGCTCTT CAACGTCGGC GCCGAGCGCA TGCTGGGCTA TATGGCGGCC GAAGTCGTCA ACAAGATCAA CCCCAGCGAC ATCCATGACC CGCAGGAAGT GATGGCGCGG GCCCAGGCGC TGAGCGTGGA GCTCGCCACC ACCATCACGC CCGGTTTCGA GGCGCTGGCC TTCAAGGCCT CACGCGGCAT TGAGGACATT TACGAGCTGA CCTACATCTG CAAGGACGGC AGCCGCTTCC CGGCCATTGT GTCGATCACC GCCCTGCGTG ACGATTTCGG CACCGTCATC GGCTACCTGT TGATCGGCAC CGACAACTCA GTGCGCAAGC AGGTCGAAGT GGCCTTGAAA GAAGCGATGG CGGTGGCCGA AAAGGCCAAC CTCGCCAAAT CGGATTTTCT GTCCAGCATG AGCCATGAGC TGCGCACGCC GCTCAGCGCC ATCCTTGGCT TTGCGCAATT GATCGAGTCC GGCACGCCGC AGCCCACGCC GTCGCAAAAG CGCAGCGTGG ACCAGATCCT CCAGGCCGGC TGGTACCTGC TGGAGCTGAT CAACGAAATC CTGGACCTGG CGCTGATCGA GTCCGGCAGG CTCTCGCTGT CGCTGGAGCC GGTGTCGCTG GCGGAAGTCA TGCTCGAATG CGAAACCCTG GTCGAATCGC AGGCCGCCAA GCGTGGCATC CGCGTGACTT TTCCGCAGTT TTCCCTGCCC TGCTTCGTCA AGGCCGACCG CACGCGGCTC AAGCAGGTGT TGATCAACCT GCTGTCCAAC GCGATCAAGT ACAACACCAG CGGCGGAACG GTGGTGCTCA AGTGCGTGAA CGTTTCGCCC CAACGCATCC GCATTTGCGT GGAAGACACC GGCGAAGGCC TGAATCCGGC CAAAATCGCC CAGCTCTTCC AGCCCTTCAA CCGCCTGGGC CAGGAGGCCA ATACCGAACA AGGTACCGGC ATTGGCCTGG TGATGACCAA GCGGCTGATC GAGCTGATGG GCGGCGCCAT CGGCGTGGAA AGCATTGTCG GCCAAGGCAG CGTGTTCTGG ATCGAGATGG ACCTCACCGA GGAGCGTGAG CTTCACCCGG TGCTGACAAG CCTGGCGCCG GCACTGCAAA GCCAGGTGCC GACGGATCCC CGCGCCCACA CCCTGCTGTA TGTGGAAGAC AACCCGGCCA ACCTGATGCT GGTGGAAGAC CTCATCGCGC GCCGCTCCGA CATACGGCTG CTGTCGGCCC GGGACGGCAT CAGCGGCATC GCGATGGCCA AGGCCTCGCA GCCTGACATC ATCCTGATGG ACATCAACCT GCCGGGCATC AGCGGCATCA AGGCGGTGCA GATTTTGTGC GCGGACCCCT TGACGGCGCA TATTCCGGTG GTGGCGCTCA GCGCCAACGC CATACCCCGC GACATTGAAA AAGGCATGGA GGCCGGCTTC TTCCGCTACC TCACCAAACC CATCCGGATC AATGAATTCA TGGACACCCT GGACCTGGCG CTGAAGTTTT CCAAAACAAA GTCCCCACGC CCTTCCGTAC CGGAGAAAAC CGCATGA
|
Protein sequence | MCAGARTFHS ASVRLPESSK DFAHPRPGPW KRPPQSALRR IVVTFTGTWP MSPISNLSVL DAIAKADGIE VKRQEALLKT GALQTAILTS ENFSIIATDE KGIIQLFNVG AERMLGYMAA EVVNKINPSD IHDPQEVMAR AQALSVELAT TITPGFEALA FKASRGIEDI YELTYICKDG SRFPAIVSIT ALRDDFGTVI GYLLIGTDNS VRKQVEVALK EAMAVAEKAN LAKSDFLSSM SHELRTPLSA ILGFAQLIES GTPQPTPSQK RSVDQILQAG WYLLELINEI LDLALIESGR LSLSLEPVSL AEVMLECETL VESQAAKRGI RVTFPQFSLP CFVKADRTRL KQVLINLLSN AIKYNTSGGT VVLKCVNVSP QRIRICVEDT GEGLNPAKIA QLFQPFNRLG QEANTEQGTG IGLVMTKRLI ELMGGAIGVE SIVGQGSVFW IEMDLTEERE LHPVLTSLAP ALQSQVPTDP RAHTLLYVED NPANLMLVED LIARRSDIRL LSARDGISGI AMAKASQPDI ILMDINLPGI SGIKAVQILC ADPLTAHIPV VALSANAIPR DIEKGMEAGF FRYLTKPIRI NEFMDTLDLA LKFSKTKSPR PSVPEKTA
|
| |