Gene Bpro_2370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_2370 
Symbol 
ID4014984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp2463431 
End bp2464993 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content67% 
IMG OID637942036 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_549189 
Protein GI91788237 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.236919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.7616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGGTA ACGCGCAATC TCCTTGTGAC AAAGGAGTCA TTCAGGCACA ACGCAGCTTG 
CCCAGCACTT CCTTGGCCCC TTCCCTACTG ACTTCGCAGC CCTCTTCTGC CGGTGCAGAC
GCCGCCGCCC GAAAAGGCTA TGCCCTGGCC GCCACCGTCC TCGGTTCGTC CATGGCCTTC
ATCGACGGCT CGGTCGTCAA CATTGCCCTG CCCGCCATCC AGCGCGACTT TGCCAGTAGC
GCCGGCGCCA GCCTGGCGGC CATGCAGTGG GTCATCAACG CCTATCTGCT GGCGCTGGGT
TCGCTAGTGC TGGTGGGCGG CTCGCTGGGG GACAGGTTCG GGCGGCGCAG CATTTTCATC
ACCGGCATTG CGCTTTTTAC CGCCGCGTCG GCGGCCTGCG GGCTGGCCTC CGGCACGCTG
GCCCTGATTG CCGCGCGGGC GCTGCAGGGC GTGGGCGCGG CGCTGCTGGT GCCAGCCAGC
CTGGCCATTA TTGGCAACGT ATTTGAAGGC GACGCACGCG GCAAGGCGAT TGGCGCTTGG
GCGGCGTGGG CGTCCATCAC GGGTGCGGCG GGTCCGGTGC TGGGCGGCTG GCTGGTCGAT
GCAGTGTCGT GGCGCGCCAT CTTTTTTCTG AACGTACCGC TGGCCGTGGC CACCATCTGG
CTGGCCGTCT ATGCCGTGCC CGACAGCCGC GACCCCGATG CGCCGCGGCA TTTCGACTGG
CTCGGTGTGT TGCTGGTGGC CAGCGGGCTG GGTGCCCTCA CCTATGGGCT GACACTGGCG
CCCGAGCGCG GATGGGGCCA CGCGAGCGTG CTGTGGCCCC TGGTGTTGGG CGTAGTCGGG
CTGGCTGCTT TTGCCGTGGC GCAGGCGCGG GTGCGTGCGC CCATGATGCC GCCGGCGCTT
TTCAGGTCGC GCGACTTTGT CGGTGCCAAT CTGCTGACAC TGCTGCTGTA CTTTGCGCTG
GTCGGCGTGC TGTTTTTTCT GCCCTTTGTG CTGATTGGCG CCTTCCGCTA TTCGGCCACC
GCAGCGGGTG CCACGCTGCT GCCCTTCTCC ATCATTTTGG GCTTGCTGTC CTCTGCGGCC
GGCAAGGCCA TGGATCGTTT TGGCGCCAGG CTCATGCTTA TCTGCGGTCC GGTGATCGCC
GCTGCCGGCC TGGCGTTGAT GGCGCTGCCG GGTGTGGGCT GGCCTTACTG GGCGGGCTTT
TTTCCGGCCA TGGTGGTGCT GGGCCTGGGC ATGACGATTG CCATTGCACC GCTCACCACC
ACCGTGATGA ACGCGGTGTC GCCGGCCCAC GCCGGGGTGG CCTCGGGCGT GAACAACGCG
GTGGCGCGGG TGGCGGGCTT GCTCGCAGTG GCCGTGCTGG GTGTGGTGTT TGCCGCTGCC
TTGGGCGGGC CCCTGGACGG CGCACCCGCG ACTACGCTGA TCCACGCGTT TCGCTGGGTG
GTGCTGGCAG CCGTGCTGTG CGCGCTGGCC TCGGCAGCCT GTGCGGCCAT GTTTTTAACG
CCTGCACCCG CGCCAGTTAC AAAACGCAAG CCTGTCAGAA CCCGGCCAGC ACCGCCCCCT
TGA
 
Protein sequence
MLGNAQSPCD KGVIQAQRSL PSTSLAPSLL TSQPSSAGAD AAARKGYALA ATVLGSSMAF 
IDGSVVNIAL PAIQRDFASS AGASLAAMQW VINAYLLALG SLVLVGGSLG DRFGRRSIFI
TGIALFTAAS AACGLASGTL ALIAARALQG VGAALLVPAS LAIIGNVFEG DARGKAIGAW
AAWASITGAA GPVLGGWLVD AVSWRAIFFL NVPLAVATIW LAVYAVPDSR DPDAPRHFDW
LGVLLVASGL GALTYGLTLA PERGWGHASV LWPLVLGVVG LAAFAVAQAR VRAPMMPPAL
FRSRDFVGAN LLTLLLYFAL VGVLFFLPFV LIGAFRYSAT AAGATLLPFS IILGLLSSAA
GKAMDRFGAR LMLICGPVIA AAGLALMALP GVGWPYWAGF FPAMVVLGLG MTIAIAPLTT
TVMNAVSPAH AGVASGVNNA VARVAGLLAV AVLGVVFAAA LGGPLDGAPA TTLIHAFRWV
VLAAVLCALA SAACAAMFLT PAPAPVTKRK PVRTRPAPPP