| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2316 |
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| Symbol | |
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| ID | 4015044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2409308 |
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| End bp | 2409874 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637941983 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_549137 |
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| Protein GI | 91788185 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.265581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.329907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGCAACTG AACAAGAACT TTCTGACTTC CTGAAAACCG TTGAAAAGCG CGCTTTCAAG
CGCAGCGTTT ATCACGTACG GGACGAAGAA GCCGCCCTGG ATATTGTTCA GGACAGCATG
ATGAAGCTGG CGCAGCACTA TGGCGACAAG CCTGCCGCCG AACTCCCCAT GCTGTTTCAG
CGCATCTTGT CCAACACCAC CCTGGACTGG TTTCGCCGTC GCAAGACTCG AAACGCACTG
TTTTCGAACA TGAGCGACTT CGAATCGCCG GGTGAAGACG GAGATTTCGA TCTTCTGGAA
ACTTTAGAGG CCCTGACCAA CTCTGAGGGT ACGGAGAGCG CCCAGGATGC CACGGAGCGG
GCCCAGATAT TGCGAGAAAT CGAACTGGAA GTCAAGGAAC TGCCCGGCCG TCAACGGGAA
GCCTTTCTGA TGCGTTACTG GGAGGAGATG GACGTGGCTG AAACGGCTGC AGCCATGGGT
TGCTCGGAAG GCAGTGTGAA AACACACTGT TCCCGCGCAG TTCAGGCCCT CAGTAGAGCA
TTGAGCGCCA AAGGGATAAA ACTATGA
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| Protein sequence | MATEQELSDF LKTVEKRAFK RSVYHVRDEE AALDIVQDSM MKLAQHYGDK PAAELPMLFQ
RILSNTTLDW FRRRKTRNAL FSNMSDFESP GEDGDFDLLE TLEALTNSEG TESAQDATER
AQILREIELE VKELPGRQRE AFLMRYWEEM DVAETAAAMG CSEGSVKTHC SRAVQALSRA
LSAKGIKL
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