Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2297 |
Symbol | |
ID | 4015064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 2389233 |
End bp | 2390972 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637941964 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_549118 |
Protein GI | 91788166 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0371112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAA AAACCTACGA ATCGCTGCGC AGCGCGCGCT GGTTCGCCCC CGACGATGTG CGCTCTTTTG GCCACCGCTC GCGCGTGATG CAGCTGGGCT ATGGCCCCGA AGACTGGGTC GGCAAGCCGG TGATCGCCAT TGTGAACACC TGGAGCGACA TCGGCACCTG CCACGGCCAC TTCAAGCAGC GCGTGGAAGA CGTCAAGCGC GGCGTGCTGC AGGCCGGCGG TTTCCCGATT GAACTTCCGG CCATCTCGCT GTCGGAATCC ATCGTCAAGC CCACCACCAT GCTCTACCGC AACATGCTGG CCATGGAAAC CGAAGAGCTG CTGCGCAGCC ACCCGATCGA CGGCGTGGTG TTGATGGGTG GCTGCGACAA GACCACGCCC GGCCTGCTGA TGGGTGCGAT GAGCGCGGGC ATGCCCTGCA TCTACCTGCC GGCTGGCCCC ATGCTGAGCG GCAACGTCAA GGGCAAGGTG CTGGGCTCGG GTTCAGACAC CTGGAAATAC TGGGACGACC GGCGCGCCGG CAAGATCAGC GCGGCCCAAT GGCTGGAAGT CGAAGGCGGC ATTGCCCGCA GCCACGGCCA CTGCATGACC ATGGGCACGG CCAGCACCAT GACGGGCATT GCCGAGGCCT GCGGATTCAC GCTGCCGGGT GCATCGTCCA TTCCCGCAGT GGACGCCAAC CACATCCGCA TGGCCAGCGA ATGTGGCCGC CGCGTGGTCA GCATGGTCTG GGAAGACCTG ACTCCGGCCA AAATGCTCAG CCGCGCCTCG TTTGAAAACG CCATCGTGAT CGCCATGGCC ATGGGTTGCT CGACCAACGC CATCATTCAC CTGGTGGCCA TGTCGCGCCG CGCCGGCGAG CACTGCGCCG TGGGTCTGGA CGACTTCGAC GCCGCCAGCC GCAAGGTGCC CGTGATCGCC AATATCCGGC CCAGCGGCGA CACCTACCTG ATGGAAGACT TCTACTTCGC GGGTGGCATG CGCGGCATGA TGAGCCGCTT GACCAGCCAT CTGAAGCTGG ACGCCATGAC GGTCAGCGGC CGCACCCTGG GCGAAACGCT GGAAGGTGCC GAGGTCTACA ACGACGACGT GATCCGGCCA CTGGACAATC CCATTTATGC CGAAGGCGCG CTCGCCGTGC TGCGCGGCAA CCTGGCGCCC GGCGGCTGCG TGATCAAGCC CAGCGCGTGC GCCCCGAAGT TCCTGAAGCA CACTGGCCCG GCCCTGGTGT TTGACGACTA CCCATCCATG AAGGCAGCCG TTGACGACGA GAACCTTGAC GTCACAGAAA ACCATGTCAT GGTGCTGCGC AACGCCGGCC CGCAGGGCGG CCCGGGCATG CCCGAGTGGG GCATGTTGCC CATTCCCCTG AAGCTGGTGA AGCAGGGCGT GAAAGACATG GTGCGCATTT CAGACGCCCG CATGAGTGGA ACGAGCTACG GCGCATGCAT CCTGCATGTG GCGCCTGAAG CCTACATCGG CGGCCCGCTG GCACTGGTCA AAACCGGCGA CCTGATTTCG GTGGACGTGC CAGGCCGGCG CATTCACCTG GAGGTCAGCG ACGAAGAACT GGCGCAGCGC CGGGCCGCCT GGACGCCGCT GCCCAAACGC TATGAACGCG GCTACGGCTG GATGGCCGCG CGCCATATCC AGCAGGCCGA CCAGGGCTGT GATTTTGATT TTCTGGAAAC CTCGTTTGGC GCGCCGGTGG GCGAGCCCGA CATTTACTGA
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Protein sequence | MSKKTYESLR SARWFAPDDV RSFGHRSRVM QLGYGPEDWV GKPVIAIVNT WSDIGTCHGH FKQRVEDVKR GVLQAGGFPI ELPAISLSES IVKPTTMLYR NMLAMETEEL LRSHPIDGVV LMGGCDKTTP GLLMGAMSAG MPCIYLPAGP MLSGNVKGKV LGSGSDTWKY WDDRRAGKIS AAQWLEVEGG IARSHGHCMT MGTASTMTGI AEACGFTLPG ASSIPAVDAN HIRMASECGR RVVSMVWEDL TPAKMLSRAS FENAIVIAMA MGCSTNAIIH LVAMSRRAGE HCAVGLDDFD AASRKVPVIA NIRPSGDTYL MEDFYFAGGM RGMMSRLTSH LKLDAMTVSG RTLGETLEGA EVYNDDVIRP LDNPIYAEGA LAVLRGNLAP GGCVIKPSAC APKFLKHTGP ALVFDDYPSM KAAVDDENLD VTENHVMVLR NAGPQGGPGM PEWGMLPIPL KLVKQGVKDM VRISDARMSG TSYGACILHV APEAYIGGPL ALVKTGDLIS VDVPGRRIHL EVSDEELAQR RAAWTPLPKR YERGYGWMAA RHIQQADQGC DFDFLETSFG APVGEPDIY
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