| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2278 |
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| Symbol | |
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| ID | 4015045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2368712 |
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| End bp | 2370115 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637941946 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_549100 |
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| Protein GI | 91788148 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGGC AAGCGCCTGC GCCGGCGCAG GAGCCCGACC TCAAGCCGCT GATCCCCAAC
GGTCCACTGC AGGCCATCAC GCCGGGCCAA GCCGGCTCGC ACCAGATTGC GTCCACCGAG
CCGCCCAGGG AGTTGTGGGA CCGGATTCGC CGCGGCTTTG CCATGCCCAA CCTGCAAAAC
GAACTGGTGA CTGACCGTGA GCAGTGGTAT GCCAGCCGGC CCGACTACAT CCAGCGCATG
ACCGAGCGCT CCAGCAAGTA TCTCTTTCAT ATTGTTGAAG AGCTGGAGCG CCGCCAGATG
CCTACCGAAC TGGCCCTGTT GCCCTTCATT GAGAGCGCCT TTAACCCCCA GGCCGTTTCC
AGCGCCAAGG CCGCCGGGAT GTGGCAGTTC ATGCCCGCCA CGGGCAAGTA CTTTGACCTG
AAGCAAAACG CTTTTCGCGA TGACCGCCGC GATGTTCTGG CCTCGACCCG GGCGGCGCTG
GATTACCTGC AAAAGCTCTA CGGCATGTTT GGTGACTGGC ACCTGGCGCT GGCCGCCTAC
AACTGGGGTG AAGGCAGCGT GGGCCGCGCG ATCGCCAAAA ACCAGAGGGC CGGCCTGGGC
ACCAGTTACC TCGACCTCAA CATGCCGGCG GAGACCCGGC TTTACGTGCC CAAGCTGCAG
GCCGTGAAAA ACATCGTGGC GAACCCGCAG GGGTTCGGCA CGGAACTGCC GCTGATCGAA
AACCACCCCT ATTTCCAGCA GGTGATGATC ACGCGCGACA TCGATGTGAC CCTGGCCGCA
CGGCTGGCCG ATGTCAAGCT TGAAGACTTC AAGGCGCTCA ATCCCTCGGC CCATCGCCCG
GTCATCATCG CGGCTGGCAC GCCCCACATC TTGCTGCCCT GGGACAATGC CATCGTCTTT
CAACGCAATT TTGACGCCTA CACCCAGGGC CAATATGCCA GCTGGACCGC ATGGACAGCC
CCGACAACCA TGAGTCCGGC CGAGGCAGCG CGACGCACCG GAATGAGCGA GACCGATCTG
CGCAGCGTGA ACAACATACC ACCGCGCATG TTGATCAAGG CAGGCTCCAC CCTGCTGGTG
CCGCGATCGG CAAAAATGGA AAATGACGTG ACAGGCCACC TGGCCGACAG CGCTCAGGTT
TCATTGGCGC CTGAAATGGT CACGCGGCGT ACCACCGTCA AGGCACGCAA AGGTGAATCA
GTCGCCACCA TCGCCAGGCG CTACAAATTG AGCGCGGCCA GCGTGGCTGA ATGGAATGGC
GTCAGTGCTT CTGCCGCCTT CAAGCTGGGG CAACAGGTGG TTGTGTTCTT GCCGGTCAAG
AGCCGTGCTT CCTCCGGGCG CAGCAATGTC AAAGCCGTCA AGCGCAGCAC CAGCAAGACC
ATTGTCAAGT CGCGAAGACG CTGA
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| Protein sequence | MTGQAPAPAQ EPDLKPLIPN GPLQAITPGQ AGSHQIASTE PPRELWDRIR RGFAMPNLQN
ELVTDREQWY ASRPDYIQRM TERSSKYLFH IVEELERRQM PTELALLPFI ESAFNPQAVS
SAKAAGMWQF MPATGKYFDL KQNAFRDDRR DVLASTRAAL DYLQKLYGMF GDWHLALAAY
NWGEGSVGRA IAKNQRAGLG TSYLDLNMPA ETRLYVPKLQ AVKNIVANPQ GFGTELPLIE
NHPYFQQVMI TRDIDVTLAA RLADVKLEDF KALNPSAHRP VIIAAGTPHI LLPWDNAIVF
QRNFDAYTQG QYASWTAWTA PTTMSPAEAA RRTGMSETDL RSVNNIPPRM LIKAGSTLLV
PRSAKMENDV TGHLADSAQV SLAPEMVTRR TTVKARKGES VATIARRYKL SAASVAEWNG
VSASAAFKLG QQVVVFLPVK SRASSGRSNV KAVKRSTSKT IVKSRRR
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