| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2176 |
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| Symbol | |
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| ID | 4015171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2271346 |
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| End bp | 2273466 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637941846 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_549001 |
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| Protein GI | 91788049 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00882926 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.14877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGAAG TCACTGAAGT CATTACGGAT TTGCCTGATT TATCCCCTGC CGGAGAATTT
GTCAGCTTTC CCGATTCGCC CTTTGAGCTG TTCATGCCTT ACCCGCCGGC AGGTGACCAG
CCGACCGCGA TTGCCCAGCT GGTGGAAGGC GTCAACGATG GCGAAGTGTT CCAGACCCTG
CTGGGCGTCA CGGGTTCGGG CAAGACCTTC ACCATGGCCA ACGTGATCGC GCGCCTGGGG
CGCCCGGCAA TCGTATTTGC GCCCAACAAG ACCCTGGCAG CGCAGCTTTA CAGCGAGTTC
CGGGAGTTTT TCCCGAAGAA CGCGGTGGAG TATTTCGTCA GTTATTACGA CTACTACCAG
CCCGAGGCCT ACGTGCCGCA GCGCGATCTT TTTATCGAAA AAGACTCCGC CATCAACGAG
CACATCGAGC AGATGCGCCT TTCAGCCACC AAGAGCGTGC TGGAGCGCCG GGACACCATC
ATCGTCGGCA CCGTGAGCGC GATCTACGGC ATTGGGGCAC CCGAGGATTA CACCCAGATG
CGCTTCATCG CGCGTACTGG CGACAAGATG GGACAGCGCG ACGTCATTGC CCGCCTGATC
CGCATGCAGT ACACCCGTAA TGAACAGGAT TTTGCGCGCG GCACCTTCCG GGTACGCGGC
GACGTGATCG ATATCTTTCC GGCCGAGCAT TCCGAACTGG CCATCCGCAT CGAGCTGTTT
GACGACGAGA TCGAAAGCCT GCAGCTGTTT GACCCGCTCA CCGGGCGTAT CCGGCAAAAA
GTCCCGCGTT TTGTCGTGTA TCCCAAAAGC CACTACGTGA CGCCGCGTGA CAAGGTCATG
GCGGCGGTGG AGACCATCAA GCTGGAGCTG TCCGAGCGGG TGGGGCAGTT TGTGGCCGAC
GGCAAGCTGG TGGAGGCCCA GCGGATCGAG CAGCGCACCC GGTTTGACCT AGAGATGCTC
AGCGAGATCG GGCACTGCAA GGGGATTGAA AACTACACCC GCCACCTGAG CGGATCGGCG
CCGGGTTCAG CACCGTCAAC CCTGTGCGAC TACCTGCCCA AGGATGCGGT GATGTTCCTG
GATGAGAGCC ACGTCATGAT CGGTCAGCTC AACGCCATGT ACAACGGCGA CCGGGCGCGC
AAGACCACGC TGGTGGAATA CGGCTTCAGG CTGCCCAGCG CGCTGGACAA CCGGCCGCTC
AAGTTTGACG AGTTCGAAGC CAAGATGCGC CAGGCCATCT TTGTGTCTGC CACACCGGCG
GCCTACGAGC AGGAACACGC GGGCCAGGTG GTGGAGCAGG TTGTCAGGCC CACCGGGCTG
GTGGACCCGC AGGTGGAGGT GCGGCCGGCC ACGCATCAGG TCGATGATGT GCTGCAGGAA
ATCCGCATCC GGGTCGACCG GAACGAGCGG GTGCTGATCA CCACCTTGAC CAAGCGGATG
GCCGAGCAGC TCACCGATTA CCTGGGCGAC AACGGAGTGA AAGTTCGCTA TCTGCACAGT
GACGTGGATA CGGTCGAGCG CGTGGAAATT TTGCGCGACC TGCGGCTCGG TGCATTTGAC
GTGCTGGTCG GCATCAATTT GCTGCGCGAA GGCCTGGACA TTCCCGAGGT CTCGCTGGTG
GCGATTCTGG ATGCGGACAA GGAAGGTTTT TTAAGGTCGG AGCGTAGCCT GATTCAAACC
ATTGGCCGGG CGGCCCGAAA CCTGAACGGC CGTGCCATTC TGTATGCCGA CCGCATCACC
GATTCCATGA AAAAAGCCAT GGACGAAACC GAGCGCCGCC GCAACAAACA AATTGCATTC
AACCTGGAGC ATGGCATTAC GCCGCGAAGC ATTGTCAAAC GAATCAAAGA CCTGATTGAT
GGCGTTTACA GCGAAAAATC CGGCAAGGAA GCTGAAAAGC TTGAAATGCA AAAGGCGCTC
GTGGAAGACA TGAGCGAGAA AGACATCGCC CGTGAGATCA AGCGGCTGGA AAAGCAGATG
GTTGAACACG CCAGGAACCT GGAGTTCGAA AAAGCCGCCA GGATTCGAGA CCAGCTGCAC
ACGCTCAAGG AACAGGCTTT TGGCGCACCG GGCGCGGACA ATGTGGAGGT TATTGCGGCT
TCGGGTGCGG GGTCGCGCTA G
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| Protein sequence | MPEVTEVITD LPDLSPAGEF VSFPDSPFEL FMPYPPAGDQ PTAIAQLVEG VNDGEVFQTL
LGVTGSGKTF TMANVIARLG RPAIVFAPNK TLAAQLYSEF REFFPKNAVE YFVSYYDYYQ
PEAYVPQRDL FIEKDSAINE HIEQMRLSAT KSVLERRDTI IVGTVSAIYG IGAPEDYTQM
RFIARTGDKM GQRDVIARLI RMQYTRNEQD FARGTFRVRG DVIDIFPAEH SELAIRIELF
DDEIESLQLF DPLTGRIRQK VPRFVVYPKS HYVTPRDKVM AAVETIKLEL SERVGQFVAD
GKLVEAQRIE QRTRFDLEML SEIGHCKGIE NYTRHLSGSA PGSAPSTLCD YLPKDAVMFL
DESHVMIGQL NAMYNGDRAR KTTLVEYGFR LPSALDNRPL KFDEFEAKMR QAIFVSATPA
AYEQEHAGQV VEQVVRPTGL VDPQVEVRPA THQVDDVLQE IRIRVDRNER VLITTLTKRM
AEQLTDYLGD NGVKVRYLHS DVDTVERVEI LRDLRLGAFD VLVGINLLRE GLDIPEVSLV
AILDADKEGF LRSERSLIQT IGRAARNLNG RAILYADRIT DSMKKAMDET ERRRNKQIAF
NLEHGITPRS IVKRIKDLID GVYSEKSGKE AEKLEMQKAL VEDMSEKDIA REIKRLEKQM
VEHARNLEFE KAARIRDQLH TLKEQAFGAP GADNVEVIAA SGAGSR
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