| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2174 |
|---|
| Symbol | |
|---|
| ID | 4015169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 2269075 |
|---|
| End bp | 2269929 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637941844 |
|---|
| Product | extradiol ring-cleavage dioxygenase III subunit B |
|---|
| Protein accession | YP_548999 |
|---|
| Protein GI | 91788047 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3384] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.804117 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.209302 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCCCA TCCCTGATGC CGCCACGCTG GACCGGCTCG CGTCCCTGAA GAAATCAGAA
AGAATGCCGG TGCTTTTTCT CGGCCATGGC AGTCCCATGA ACGCGCTTGG CGACAACGAA
TACCGGCGCA GCTGGCAGGT GCTGGGCGCC GAATTTGGAT CGAAACTGCC CCGTCCGCAG
CTGATTTTGT GCATTTCCGC GCACTGGCTG ACCGAGGGCT GGTGGCTAAC GGCCATGGCC
CAGCCCAAGA CCATCCATGA CTTTGGCGGT TTTCCGCAGG AACTCTTTGA CCAGCAATAC
CCGGCGCCAG GCGACCCCGC AGCGGCGCAG GCGCTCAGCC TGCTGGTGCG GCAGCGCGCC
TCGGAACCGC TGGGGCTGGA CGTGGGTGAA TGGGGGCTGG ACCACGGTAG CTGGTCTGTG
CTCAAGCCCA TGTTTCTGGG AGCGGACATC CCGGTCATCC AGCTCAGCAT GGATTACAGC
CGGGCACCCG ACGAACACTA TGCGCTGGCG CGACAACTCA AGGCCCTGCG CGACCGGGGC
GTGCTGATTG TGGGCAGCGG CAACATCGTG CATAACCTGC GCCAGATGCA GCGGGGGGCC
ACTGGCAGCC AGGCCTACGA TTGGGCCCTG GAATTCGACC AGACGATTGG CGGCTACCTG
CAGCAGGGCA ACCTCGCCGC CTTGCCTGGC TTCCAGAAAC TCGGACAGGT GGCCAAAATG
GCCCACCCGA CCCACGAGCA CTATCTGCCG CTGCTATACG CGGCAGGCGC TGTCGAGGCC
CGGGAGCCGA TGCGGTTTTT CAACACCAGC TTTCAGGGCG GCTCGATCTC GATGCGTTCG
GTGGTCTGGG GCTAG
|
|---|
| Protein sequence | MLPIPDAATL DRLASLKKSE RMPVLFLGHG SPMNALGDNE YRRSWQVLGA EFGSKLPRPQ
LILCISAHWL TEGWWLTAMA QPKTIHDFGG FPQELFDQQY PAPGDPAAAQ ALSLLVRQRA
SEPLGLDVGE WGLDHGSWSV LKPMFLGADI PVIQLSMDYS RAPDEHYALA RQLKALRDRG
VLIVGSGNIV HNLRQMQRGA TGSQAYDWAL EFDQTIGGYL QQGNLAALPG FQKLGQVAKM
AHPTHEHYLP LLYAAGAVEA REPMRFFNTS FQGGSISMRS VVWG
|
|---|
| |