Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2103 |
Symbol | |
ID | 4015251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 2193041 |
End bp | 2193574 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637941772 |
Product | translation initiation factor 3 |
Protein accession | YP_548928 |
Protein GI | 91787976 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.286317 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.133955 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCCTG AGGTGCGCCT CACAGGGCCC GACAATGAGC CGCTGGGCAT TGTCAGCATC ATGGAGGCCT TGCGCCTGGC CGGTGAGGCC GACGTAGACC TGGTCGAGAT ATCGCCTACG GCGGTGCCGC CGGTGTGCCG GTTGATGGAC TATGGCAAGT TCAAGTACGC CGAGCAGAAG AAGGCGGCTG AAGCGAAGTC CAAGCAAAAA GTGATCGAGA TCAAGGAAAT CAAATTCCGG CCCGGCACTG ACGATGGGGA CTACAACATC AAATTGCGCA ACATCAAGCG CTTTTTGGAA GAGGGCGACA AGTGCAAGAT TACCCTGCGC TTTCGCGGTC GCGAGATCAC GCACCAAGAG CTGGGCCTGG CCCTGTTGGC GCGTATTCGC GATGAGCTGG CAGATTTGAT TGTGGTGGAG CAGTTCCCCA AGCTTGAAGG CAGGCAGATG GTCATGATGA TCGCGCCAGG CCGCAAGAAG CCCGGTGCGG GCAAACCGGC AGCTGAAACG GCTTCGACGC CGTCCGTAGC CTGA
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Protein sequence | MAPEVRLTGP DNEPLGIVSI MEALRLAGEA DVDLVEISPT AVPPVCRLMD YGKFKYAEQK KAAEAKSKQK VIEIKEIKFR PGTDDGDYNI KLRNIKRFLE EGDKCKITLR FRGREITHQE LGLALLARIR DELADLIVVE QFPKLEGRQM VMMIAPGRKK PGAGKPAAET ASTPSVA
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