Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2052 |
Symbol | |
ID | 4015278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 2132690 |
End bp | 2134384 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637941724 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_548880 |
Protein GI | 91787928 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0538673 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCA AGACCATTCA GCTCAACCCC CGCAGCAAAA ACATCACCGA AGGCAAATCG CGCGCGCCCA ACCGCTCGAT GTACTACGCC ATGGGCTATG AAGAGGCCGA CTTCAAGAAG CCCATGATTG GTGTGGCCAA CGGGCACAGC ACCATCACCC CCTGCAACAG CGGCCTGCAA AAGCTGGCGG ACGCGGCCAT TGCCGGCATT GAAGAAGCCG GCGGCAACGC CCAGGTGTTC GGCACGCCCA CCATCTCGGA CGGCATGGCC ATGGGCACCG AGGGCATGAA GTACTCGCTG GTCAGCCGCG AAGTGATCTC CGACTGCATC GAAACCTGCG TGCAGGGCCA GTGGATGGAC GGCGTGCTGG TGATCGGCGG CTGCGACAAG AACATGCCCG GCGGCCTGAT GGGCATGCTG CGCGCCAACG TGCCGGCCAT CTACGTCTAT GGCGGTACCA TTTTGCCGGG CAGCTACAAG GGCAAAGACC TCAACATCGT CAGCGTGTTT GAAGCCGTCG GCGAAAACGC AGCAGGCCGC ATGAGCGATG AAGACCTGCT GCAAATCGAG CGCCGCGCCA TTCCCGGCAC CGGTAGCTGC GGCGGCATGT ACACGGCCAA CACCATGTCC AGCGCCTTCG AGGCGCTCGG CATTTCGCTG CCCTACTCCA GCACCATGGC CAATCCGCAC GACGAGAAAA TGAACTCGGC CAGGGAGTCC GCCAAGGTCC TGGTCGAAGC CATCAAGAAA GACATCAAGC CGCGCGATCT CGTCACGAAG AAAGCCATTG AAAACGCCGT GGCAGTGATC ATGGCCACGG GCGGCTCCAC CAATGCCGTG CTGCACTTCC TGGCGATTGC GCATGCCGCC GGCGTGGACT GGACAATCGA CGACTTCGAA CGCGTGCGCC AAAGAACGCC GGTGCTGTGC GACCTGAAGC CGTCCGGCAA GTACCTGGCC GTGGACCTGC ACCGCGCCGG CGGCATTCCG CAGGTCATGA AGATGCTGCT GGCGGCCGGC CTGCTGCATG GCGACTGCCT GACGATCACC GGCCAAACCA TTGCCGAGGT GCTGAAGGAT GTGCCCGAAG CGCCGCGCGC CGACCAGGAC GTGATTCGCC CCATCAGCAA CCCCATGTAC GCCCAGGGCC ACCTGGCCAT CCTGAAGGGC AACCTCTCGC CTGAAGGCTG CGTGGCCAAA ATCACCGGCC TGAAAAACCC GGTCATGACG GGCCCGGCCC GCGTATTTGA CGACGAGCAG TCGGCGCTGG CCGCCATCCT GGCCGGCAAG ATCAAGGCGG GCGACGTGAT GGTGCTGCGT TACCTCGGCC CCAAGGGCGG TCCCGGCATG CCTGAAATGC TGGCGCCTAC CGGTGCGCTG ATTGGCGCCG GCCTGGGCGA AAGCGTGGGC CTGATCACCG ACGGCCGCTT CTCCGGCGGC ACCTGGGGCA TGGTAGTCGG CCATGTGGCC CCCGAAGCGG CCGCCGGCGG CAATATCGCA TTCATCAACG AAGGCGACTC CATCACCATT GACTCAAAAC AGTTGCTGCT GCAACTGAAC ATCAGCGACG CGGAGCTGGA AAAACGCAAG GTCGGCTGGA AAGCACCGGC ACCGCGCTAC AACCGCGGCG TGCAGGCCAA GTTTGCCTTC AACGCGTCGA GTGCCAGCAA GGGTGCGGTG CTGGACGACT ATTGA
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Protein sequence | METKTIQLNP RSKNITEGKS RAPNRSMYYA MGYEEADFKK PMIGVANGHS TITPCNSGLQ KLADAAIAGI EEAGGNAQVF GTPTISDGMA MGTEGMKYSL VSREVISDCI ETCVQGQWMD GVLVIGGCDK NMPGGLMGML RANVPAIYVY GGTILPGSYK GKDLNIVSVF EAVGENAAGR MSDEDLLQIE RRAIPGTGSC GGMYTANTMS SAFEALGISL PYSSTMANPH DEKMNSARES AKVLVEAIKK DIKPRDLVTK KAIENAVAVI MATGGSTNAV LHFLAIAHAA GVDWTIDDFE RVRQRTPVLC DLKPSGKYLA VDLHRAGGIP QVMKMLLAAG LLHGDCLTIT GQTIAEVLKD VPEAPRADQD VIRPISNPMY AQGHLAILKG NLSPEGCVAK ITGLKNPVMT GPARVFDDEQ SALAAILAGK IKAGDVMVLR YLGPKGGPGM PEMLAPTGAL IGAGLGESVG LITDGRFSGG TWGMVVGHVA PEAAAGGNIA FINEGDSITI DSKQLLLQLN ISDAELEKRK VGWKAPAPRY NRGVQAKFAF NASSASKGAV LDDY
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